RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CMA1P23946 247 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 NDUFA8P51970 172 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 NUCB2P80303 420 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 RBM10P98175 930 aaKnown RBP12.63□□□□□ -0.39
VMP1-211ENST00000591315 GTF2BQ00403 316 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 DSC1Q08554 894 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 HYAL1Q12794 435 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 CUL4BQ13620 913 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 PTPROQ16827 1216 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 DCAF4L1Q3SXM0 396 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 HERC4Q5GLZ8 1057 aaPredicted RBP12.63□□□□□ -0.39
VMP1-211ENST00000591315 ADALQ6DHV7 355 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 MPZL3Q6UWV2 235 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 ZNF720Q7Z2F6 126 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 COLGALT2Q8IYK4 626 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 FSIP1Q8NA03 581 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 AUTS2Q8WXX7 1259 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 MRPS27Q92552 414 aaKnown RBP12.63□□□□□ -0.39
VMP1-211ENST00000591315 BICD1Q96G01 975 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 ADPGKQ9BRR6 497 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 STRA6Q9BX79 667 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 TRIM9Q9C026 710 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 IGFLR1Q9H665 355 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 PANK4Q9NVE7 773 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 MARCH5Q9NX47 278 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 HPSEQ9Y251 543 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 NCOR1O75376 2440 aa12.63□□□□□ -0.39
VMP1-211ENST00000591315 TCF20Q9UGU0 1960 aaKnown RBP12.63□□□□□ -0.39
VMP1-211ENST00000591315 HIDE1A8MVS5 230 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 NRP1O14786 923 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 FSCN2O14926 492 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 PER2O15055 1255 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 LINC01565O15544 149 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 TOM1L1O75674 476 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 PPP1R37O75864 691 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 MCF2P10911 925 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 TNFSF9P41273 254 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 GRM5P41594 1212 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 ALDH7A1P49419 539 aaKnown RBP12.62□□□□□ -0.39
VMP1-211ENST00000591315 ASIC1P78348 528 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 PLCB3Q01970 1234 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 COASYQ13057 564 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 NAB2Q15742 525 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 PLPP4Q5VZY2 271 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 TAS1R1Q7RTX1 841 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 RBM23Q86U06 439 aaKnown RBP12.62□□□□□ -0.39
VMP1-211ENST00000591315 HACE1Q8IYU2 909 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 SLC17A8Q8NDX2 589 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 ZSWIM2Q8NEG5 633 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 IGSF21Q96ID5 467 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 ZMAT2Q96NC0 199 aaKnown RBP12.62□□□□□ -0.39
VMP1-211ENST00000591315 FAM193BQ96PV7 902 aaPredicted RBP12.62□□□□□ -0.39
VMP1-211ENST00000591315 SCAND2PQ9GZW5 306 aaPredicted RBP12.62□□□□□ -0.39
VMP1-211ENST00000591315 LMAN2LQ9H0V9 348 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 TNMDQ9H2S6 317 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 NSUN3Q9H649 340 aaKnown RBP12.62□□□□□ -0.39
VMP1-211ENST00000591315 MRPL44Q9H9J2 332 aaKnown RBP12.62□□□□□ -0.39
VMP1-211ENST00000591315 UBN1Q9NPG3 1134 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 KANSL3Q9P2N6 904 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
VMP1-211ENST00000591315 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 HNRNPDLO14979 420 aaKnown RBP12.61□□□□□ -0.39
VMP1-211ENST00000591315 PRPF6O94906 941 aaKnown RBP12.61□□□□□ -0.39
VMP1-211ENST00000591315 ALDH2P05091 517 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 GAP43P17677 238 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 MATR3P43243 847 aaKnown RBP eCLIP12.61□□□□□ -0.39
VMP1-211ENST00000591315 OR1G1P47890 313 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 LIG4P49917 911 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 SOX4Q06945 474 aaPredicted RBP12.61□□□□□ -0.39
VMP1-211ENST00000591315 SPAG1Q07617 926 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 DLX2Q07687 328 aaPredicted RBP12.61□□□□□ -0.39
VMP1-211ENST00000591315 NOLC1Q14978 699 aaKnown RBP eCLIP12.61□□□□□ -0.39
VMP1-211ENST00000591315 SLC10A6Q3KNW5 377 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 TIGD5Q53EQ6 642 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 ZPBP2Q6X784 338 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 MAP4K3Q8IVH8 894 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.61□□□□□ -0.39
VMP1-211ENST00000591315 MICAL1Q8TDZ2 1067 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 KCNN1Q92952 543 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 PAGE5Q96GU1 130 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 C7orf25Q9BPX7 421 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 GOLGA2P5Q9HBQ8 144 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 TLR9Q9NR96 1032 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 FAN1Q9Y2M0 1017 aa12.61□□□□□ -0.39
VMP1-211ENST00000591315 FAM237AA0A1B0GTK4 181 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 SMIM28A0A1B0GU29 152 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 H0YCG3 227 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 CLDN3O15551 220 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 FAM189A1O60320 539 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 GCNT3O95395 438 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 PIGRP01833 764 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 SLFN14P0C7P3 912 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 CXCL8P10145 99 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 HOXD13P35453 343 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 PPM1AP35813 382 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 NRIP1P48552 1158 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 UBE3AQ05086 875 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 MCL1Q07820 350 aa12.6□□□□□ -0.39
VMP1-211ENST00000591315 GRIK3Q13003 919 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms