RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TIPINQ9BVW5 301 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 KCNH7Q9NS40 1196 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 P4HA2O15460 535 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 CAND2O75155 1236 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 TRIM42Q8IWZ5 723 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 C9orf72Q96LT7 481 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 RIT2Q99578 217 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 DDX4Q9NQI0 724 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 PARVAQ9NVD7 372 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 ZFP69BQ9UJL9 534 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 USP15Q9Y4E8 981 aaPredicted RBP18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 H0Y3Z8 333 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 CHRNA5P30532 468 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 STAT4Q14765 748 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 P3H1Q32P28 736 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 TRIM72Q6ZMU5 477 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 PCGF5Q86SE9 256 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 EPS8L3Q8TE67 593 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 CDKL2Q92772 493 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 VCX3BQ9H321 246 aa18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 CPSF2Q9P2I0 782 aaKnown RBP18.21■□□□□ 0.51
SMARCA4-215ENST00000590574 TMEM120BA0PK00 339 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 CCT8L1PA6NM43 557 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 SLC12A3P55017 1021 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 SURF1Q15526 300 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 CIAPIN1Q6FI81 312 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 SLC13A5Q86YT5 568 aaPredicted RBP18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 KCNV2Q8TDN2 545 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 FAF2Q96CS3 445 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 NLRP4Q96MN2 994 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 ARL2BPQ9Y2Y0 163 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 IVNS1ABPQ9Y6Y0 642 aa18.21■□□□□ 0.5
SMARCA4-215ENST00000590574 PDE1BQ01064 536 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 KYNUQ16719 465 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 SLC20A1Q8WUM9 679 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ADAM33Q9BZ11 813 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ZNF302Q9NR11 478 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ZNF277Q9NRM2 450 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 AKT3Q9Y243 479 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ESRRAP11474 423 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ZNF699Q32M78 642 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 TRPM8Q7Z2W7 1104 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 CYP2W1Q8TAV3 490 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 AGBL1Q96MI9 1066 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 PI4K2AQ9BTU6 479 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 TUBB6Q9BUF5 446 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 DCTN4Q9UJW0 460 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 SPEF2Q9C093 1822 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 FAM86B1E9PN63 330 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 FAM86B2P0C5J1 330 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ITGA8P53708 1063 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 MKRN3Q13064 507 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 HAS1Q92839 578 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 TRIM55Q9BYV6 548 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 RPF1Q9H9Y2 349 aaKnown RBP18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 DDTLA6NHG4 134 aaPredicted RBP18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ATP5HO75947 161 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 GYS1P13807 737 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ECE1P42892 770 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ZNF720Q7Z2F6 126 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 SESTD1Q86VW0 696 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 TMEM8AQ9HCN3 771 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 PPP1R9AQ9ULJ8 1098 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 PCDHGC5Q9Y5F6 944 aa18.2■□□□□ 0.5
SMARCA4-215ENST00000590574 ACOT2P49753 483 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 RBM15Q96T37 977 aaKnown RBP eCLIP18.19■□□□□ 0.52e-6■■■■□ 21.5
SMARCA4-215ENST00000590574 PCSK1NQ9UHG2 260 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 ARP10275 920 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 LRRC34Q8IZ02 419 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 KIFC3Q9BVG8 833 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 FGFR1OP2Q9NVK5 253 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 DNAJC19Q96DA6 116 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 ROPN1BQ9BZX4 212 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 ROPN1Q9HAT0 212 aaPredicted RBP18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 CES2O00748 559 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 TTC13Q8NBP0 860 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 SLC35C1Q96A29 364 aa18.19■□□□□ 0.5
SMARCA4-215ENST00000590574 RGPD2P0DJD1 1756 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 GTPBP10A4D1E9 387 aaKnown RBP18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 DDX3XO00571 662 aaKnown RBP eCLIP18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 ZBED1O96006 694 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 CASP5P51878 434 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 SPP2Q13103 211 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 STXBP2Q15833 593 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 KLHL38Q2WGJ6 581 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 ZNF667Q5HYK9 610 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 APTXQ7Z2E3 356 aaKnown RBP18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 PACS2Q86VP3 889 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 ANKMY2Q8IV38 441 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 FBXO25Q8TCJ0 367 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 CBWD1Q9BRT8 395 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 CD248Q9HCU0 757 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 CLEC11AQ9Y240 323 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 TOM1L1O75674 476 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 HNRNPH3P31942 346 aaKnown RBP18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 GEN1Q17RS7 908 aa18.18■□□□□ 0.5
SMARCA4-215ENST00000590574 MED10Q9BTT4 135 aa18.18■□□□□ 0.5
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