RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 KCNV1Q6PIU1 500 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 BLOC1S2Q6QNY1 142 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 NLRX1Q86UT6 975 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 VSIG10LQ86VR7 867 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 HID1Q8IV36 788 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 SAMD3Q8N6K7 520 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 IL31RAQ8NI17 732 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 GATAD2BQ8WXI9 593 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 MTMR8Q96EF0 704 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 PSMG3-AS1Q96PY0 264 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 MAP3K14Q99558 947 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 MTA3Q9BTC8 594 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 KATNAL1Q9BW62 490 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 SPZ1Q9BXG8 430 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 MAF1Q9H063 256 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 EHMT1Q9H9B1 1298 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 IL23AQ9NPF7 189 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 RBM28Q9NW13 759 aaKnown RBP9.41□□□□□ -0.9
DNMT1-219ENST00000589349 MSRAQ9UJ68 235 aa9.41□□□□□ -0.9
DNMT1-219ENST00000589349 DDX41Q9UJV9 622 aaKnown RBP9.41□□□□□ -0.9
DNMT1-219ENST00000589349 LRIG2O94898 1065 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 ACTN1P12814 892 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 ZNF76P36508 570 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 NKX3-2P78367 333 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 ARHGAP1Q07960 439 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 BFSP2Q13515 415 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 UBE2SQ16763 222 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 KIAA0753Q2KHM9 967 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 SLC35G1Q2M3R5 365 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 ADCK5Q3MIX3 580 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 TMEM240Q5SV17 173 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 CELF3Q5SZQ8 465 aaKnown RBP9.4□□□□□ -0.9
DNMT1-219ENST00000589349 NFRKBQ6P4R8 1299 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 CCDC62Q6P9F0 684 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 BNC2Q6ZN30 1099 aaPredicted RBP9.4□□□□□ -0.9
DNMT1-219ENST00000589349 Q6ZUG5 572 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 TOP6BLQ8N6T0 577 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 DUSP23Q9BVJ7 150 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 BACH2Q9BYV9 841 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 METTL5Q9NRN9 209 aaKnown RBP9.4□□□□□ -0.9
DNMT1-219ENST00000589349 MTMR10Q9NXD2 777 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 SLC4A7Q9Y6M7 1214 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 MYH6P13533 1939 aa9.4□□□□□ -0.9
DNMT1-219ENST00000589349 BAZ2BQ9UIF8 2168 aaKnown RBP9.4□□□□□ -0.91
DNMT1-219ENST00000589349 GRXCR1A8MXD5 290 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 CILPO75339 1184 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 F13A1P00488 732 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 UBA1P22314 1058 aaKnown RBP9.39□□□□□ -0.91
DNMT1-219ENST00000589349 PSMA5P28066 241 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 METAP2P50579 478 aaKnown RBP eCLIP9.39□□□□□ -0.91
DNMT1-219ENST00000589349 SMAD3P84022 425 aaKnown RBP9.39□□□□□ -0.91
DNMT1-219ENST00000589349 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 APOBRQ0VD83 1088 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 TMTC3Q6ZXV5 915 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 ARMCX6Q7L4S7 300 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 UBE3DQ7Z6J8 389 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 SLC43A3Q8NBI5 491 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 GOLM1Q8NBJ4 401 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 PPTC7Q8NI37 304 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 PPM1EQ8WY54 764 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 BRF1Q92994 677 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 TIFAQ96CG3 184 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 LRRC4CQ9HCJ2 640 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 HDAC6Q9UBN7 1215 aa9.39□□□□□ -0.91
DNMT1-219ENST00000589349 LOC100996750A0A140TA64 210 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 CCDC196A0A1B0GTZ2 297 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 FAM221AA4D161 298 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 FIBPO43427 364 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 PPFIA4O75335 1185 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 TGFB3P10600 412 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 FOSL2P15408 326 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 SMARCA1P28370 1054 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 ADCY7P51828 1080 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 SP2Q02086 613 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 NEDD9Q14511 834 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 HSDL1Q3SXM5 330 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 APOA5Q6Q788 366 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 MYLIPQ8WY64 445 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 PGBD1Q96JS3 809 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 KRTAP4-6Q9BYQ5 205 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 FOXQ1Q9C009 403 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 TCEAL9Q9UHQ7 104 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 PCDHA6Q9UN73 950 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 STXBP5LQ9Y2K9 1186 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 PCDHA8Q9Y5H6 950 aa9.38□□□□□ -0.91
DNMT1-219ENST00000589349 SMCO2A6NFE2 343 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 LEFTY1O75610 366 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 STAM2O75886 525 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 MED26O95402 600 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 PGRP06401 933 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 ATP2A2P16615 1042 aaKnown RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 SPINK2P20155 84 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 EIF4A3P38919 411 aaKnown RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 THPOP40225 353 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 KCNJ6P48051 423 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 RABGGTBP53611 331 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 CCT2P78371 535 aaKnown RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
DNMT1-219ENST00000589349 MTMR1Q13613 665 aa9.37□□□□□ -0.91
DNMT1-219ENST00000589349 MPP2Q14168 576 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms