RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 LARSQ9P2J5 1176 aaKnown RBP21.48■■□□□ 1.03
TPM4-208ENST00000588410 NPHP3-ACAD11A0A0J9YXS1 232 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 PI4K2BG5E9Z4 385 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 STX6O43752 255 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 TADA2AO75478 443 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 MARCKSP29966 332 aaPredicted RBP21.47■■□□□ 1.03
TPM4-208ENST00000588410 GLUD2P49448 558 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 YARSP54577 528 aaKnown RBP21.47■■□□□ 1.03
TPM4-208ENST00000588410 CEBPZQ03701 1054 aaKnown RBP21.47■■□□□ 1.03
TPM4-208ENST00000588410 KARSQ15046 597 aaKnown RBP21.47■■□□□ 1.03
TPM4-208ENST00000588410 FAM173BQ6P4H8 233 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 SUSD6Q92537 303 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 CCDC94Q9BW85 323 aaPredicted RBP21.47■■□□□ 1.03
TPM4-208ENST00000588410 TARS2Q9BW92 718 aaKnown RBP21.47■■□□□ 1.03
TPM4-208ENST00000588410 ZSCAN16Q9H4T2 348 aaPredicted RBP21.47■■□□□ 1.03
TPM4-208ENST00000588410 MTMR6Q9Y217 621 aa21.47■■□□□ 1.03
TPM4-208ENST00000588410 CASTOR2A6NHX0 329 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 F8W810 466 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 H0YCG3 227 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 HSP90AA1P07900 732 aaKnown RBP21.46■■□□□ 1.03
TPM4-208ENST00000588410 CNPP09543 421 aaKnown RBP21.46■■□□□ 1.03
TPM4-208ENST00000588410 EPCAMP16422 314 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 PLCG1P19174 1290 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 CACNB1Q02641 598 aaPredicted RBP21.46■■□□□ 1.03
TPM4-208ENST00000588410 ITIH3Q06033 890 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 HSP90AA2PQ14568 343 aaPredicted RBP21.46■■□□□ 1.03
TPM4-208ENST00000588410 CBX2Q14781 532 aaPredicted RBP21.46■■□□□ 1.03
TPM4-208ENST00000588410 PTPAQ15257 358 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 FUT10Q6P4F1 479 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 TAS1R1Q7RTX1 841 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 ZBTB33Q86T24 672 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 SLC22A17Q8WUG5 538 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 RABGGTAQ92696 567 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 RAD54LQ92698 747 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 RPGRIP1Q96KN7 1286 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 CDT1Q9H211 546 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 TOPORSQ9NS56 1045 aaPredicted RBP21.46■■□□□ 1.03
TPM4-208ENST00000588410 ADAM28Q9UKQ2 775 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 ODF2LQ9ULJ1 636 aa21.46■■□□□ 1.03
TPM4-208ENST00000588410 PTGESO14684 152 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 DCXO43602 365 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 FAM13AO94988 1023 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 TXLNAP40222 546 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 GRM5P41594 1212 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 MCM6Q14566 821 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 USP41Q3LFD5 358 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 ARSHQ5FYA8 562 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 RARS2Q5T160 578 aaKnown RBP21.45■■□□□ 1.02
TPM4-208ENST00000588410 TAS1R3Q7RTX0 852 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 TMEM161BQ8NDZ6 487 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 CCSER1Q9C0I3 900 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 ADAM7Q9H2U9 754 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 PTPRHQ9HD43 1115 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 CCDC39Q9UFE4 941 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 ATG2AQ2TAZ0 1938 aa21.45■■□□□ 1.02
TPM4-208ENST00000588410 LILRB3O75022 631 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 ADH1AP07327 375 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 MCF2P10911 925 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 HARSP12081 509 aaKnown RBP21.44■■□□□ 1.02
TPM4-208ENST00000588410 OSTNP61366 133 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 DSG1Q02413 1049 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 TMEM31Q5JXX7 168 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 SPECC1Q5M775 1068 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 ELMSAN1Q6PJG2 1045 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 MPZL3Q6UWV2 235 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 MYCT1Q8N699 235 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 FBXL18Q96ME1 805 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 RIPOR3Q96MK2 946 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 NECTIN4Q96NY8 510 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 REEP2Q9BRK0 252 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 ZHX3Q9H4I2 956 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 BLOC1S4Q9NUP1 217 aa21.44■■□□□ 1.02
TPM4-208ENST00000588410 FBXO2Q9UK22 296 aaPredicted RBP21.44■■□□□ 1.02
TPM4-208ENST00000588410 SRPRBQ9Y5M8 271 aaKnown RBP21.44■■□□□ 1.02
TPM4-208ENST00000588410 SF3B1O75533 1304 aaKnown RBP eCLIP21.44■■□□□ 1.026e-8■■■■■ 90.6
TPM4-208ENST00000588410 TBCAO75347 108 aaKnown RBP21.43■■□□□ 1.02
TPM4-208ENST00000588410 EFEMP2O95967 443 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 MAPTP10636 758 aaKnown RBP21.43■■□□□ 1.02
TPM4-208ENST00000588410 MTHFRP42898 656 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 MATR3P43243 847 aaKnown RBP eCLIP21.43■■□□□ 1.02
TPM4-208ENST00000588410 CLCN4P51793 760 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 GLRA4Q5JXX5 417 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 KIAA0319Q5VV43 1072 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 RNF135Q8IUD6 432 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 RNF168Q8IYW5 571 aaPredicted RBP21.43■■□□□ 1.02
TPM4-208ENST00000588410 C12orf76Q8N812 135 aaPredicted RBP21.43■■□□□ 1.02
TPM4-208ENST00000588410 LARP4BQ92615 738 aaKnown RBP21.43■■□□□ 1.02
TPM4-208ENST00000588410 BICD1Q96G01 975 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 EPSTI1Q96J88 318 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 ACAP3Q96P50 834 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 PAAF1Q9BRP4 392 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 GPR62Q9BZJ7 368 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.43■■□□□ 1.02
TPM4-208ENST00000588410 ANKFY1Q9P2R3 1169 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 CACNG4Q9UBN1 327 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 DPP7Q9UHL4 492 aa21.43■■□□□ 1.02
TPM4-208ENST00000588410 LOC730098B7Z3J9 87 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 TEX28O15482 410 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 TOM1L1O75674 476 aa21.42■■□□□ 1.02
TPM4-208ENST00000588410 DDIT3P35638 169 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms