RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 PRR23BQ6ZRT6 265 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 BICD2Q8TD16 824 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 PRPF31Q8WWY3 499 aaKnown RBP9.54□□□□□ -0.88
SDF2-204ENST00000587338 ING5Q8WYH8 240 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 MBOAT7Q96N66 472 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 TBC1D32Q96NH3 1257 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 FAM126AQ9BYI3 521 aaPredicted RBP9.54□□□□□ -0.88
SDF2-204ENST00000587338 HEBP1Q9NRV9 189 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 MIOSQ9NXC5 875 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 MRPS17Q9Y2R5 130 aaKnown RBP9.54□□□□□ -0.88
SDF2-204ENST00000587338 SF3B1O75533 1304 aaKnown RBP eCLIP9.54□□□□□ -0.88
SDF2-204ENST00000587338 IGF2RP11717 2491 aa9.54□□□□□ -0.88
SDF2-204ENST00000587338 SPEGQ15772 3267 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 EDIL3O43854 480 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 TADA2AO75478 443 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 TDP2O95551 362 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 PSMC5P62195 406 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 ADCY1Q08828 1119 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 NOTUMQ6P988 496 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 DHX32Q7L7V1 743 aaKnown RBP9.53□□□□□ -0.88
SDF2-204ENST00000587338 CEP57Q86XR8 500 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 NPAS3Q8IXF0 933 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 GPR65Q8IYL9 337 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 ZNF579Q8NAF0 562 aaKnown RBP9.53□□□□□ -0.88
SDF2-204ENST00000587338 RNF149Q8NC42 400 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 CCDC148Q8NFR7 591 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 SLC7A14Q8TBB6 771 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 HASPINQ8TF76 798 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 CPB2Q96IY4 423 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 CEP170P1Q96L14 293 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 NELL2Q99435 816 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 TRIM6Q9C030 488 aaPredicted RBP9.53□□□□□ -0.88
SDF2-204ENST00000587338 NXF3Q9H4D5 531 aaKnown RBP9.53□□□□□ -0.88
SDF2-204ENST00000587338 HCFC1R1Q9NWW0 138 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 CACNG4Q9UBN1 327 aa9.53□□□□□ -0.88
SDF2-204ENST00000587338 NDRG2Q9UN36 371 aaKnown RBP9.53□□□□□ -0.88
SDF2-204ENST00000587338 LAMA1P25391 3075 aa9.52□□□□□ -0.88
SDF2-204ENST00000587338 CCDC196A0A1B0GTZ2 297 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 GDF9O60383 454 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 TSPAN1O60635 241 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 RETP07949 1114 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 AKAP5P24588 427 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 HOXA9P31269 272 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 RFC5P40937 340 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 USP11P51784 963 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 RCAN1P53805 252 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 NRLP54845 237 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 FGD1P98174 961 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 EXOSC10Q01780 885 aaKnown RBP9.52□□□□□ -0.89
SDF2-204ENST00000587338 AKAP17AQ02040 695 aaKnown RBP9.52□□□□□ -0.89
SDF2-204ENST00000587338 NCBP1Q09161 790 aaKnown RBP9.52□□□□□ -0.89
SDF2-204ENST00000587338 PPP2R5DQ14738 602 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 PSMD5Q16401 504 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 Q4G0T1 1027 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 PABPC1LQ4VXU2 614 aaKnown RBP9.52□□□□□ -0.89
SDF2-204ENST00000587338 RNF20Q5VTR2 975 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 HACE1Q8IYU2 909 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 CELF5Q8N6W0 485 aaKnown RBP9.52□□□□□ -0.89
SDF2-204ENST00000587338 TBCKQ8TEA7 893 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 CCDC51Q96ER9 411 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 CLSTN3Q9BQT9 956 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 TTPALQ9BTX7 342 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 CSRNP2Q9H175 543 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 SEMA4GQ9NTN9 838 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 KLK14Q9P0G3 267 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 VPS54Q9P1Q0 977 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 ANGPTL2Q9UKU9 493 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 GIT1Q9Y2X7 761 aa9.52□□□□□ -0.89
SDF2-204ENST00000587338 TDRD15B5MCY1 1934 aaKnown RBP9.52□□□□□ -0.89
SDF2-204ENST00000587338 ASPMQ8IZT6 3477 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 INO80B-WBP1J3KQ70 363 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 EML1O00423 815 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 PRPF3O43395 683 aaKnown RBP9.51□□□□□ -0.89
SDF2-204ENST00000587338 LRP3O75074 770 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 ECI2O75521 394 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 TDGF1P13385 188 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 AXLP30530 894 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 QARSP47897 775 aaKnown RBP9.51□□□□□ -0.89
SDF2-204ENST00000587338 GRIK3Q13003 919 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 FZD5Q13467 585 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 COL9A2Q14055 689 aaPredicted RBP9.51□□□□□ -0.89
SDF2-204ENST00000587338 HSP90AA2PQ14568 343 aaPredicted RBP9.51□□□□□ -0.89
SDF2-204ENST00000587338 EMC2Q15006 297 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 AXDND1Q5T1B0 1012 aaPredicted RBP9.51□□□□□ -0.89
SDF2-204ENST00000587338 FAM171A1Q5VUB5 890 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 B3GNT9Q6UX72 402 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 PRR23CQ6ZRP0 262 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.51□□□□□ -0.89
SDF2-204ENST00000587338 FERMT3Q86UX7 667 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 EXOC8Q8IYI6 725 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 ETNPPLQ8TBG4 499 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 MCRS1Q96EZ8 462 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 PAAF1Q9BRP4 392 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 PLA2G2FQ9BZM2 168 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 CHRDQ9H2X0 955 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 DHX33Q9H6R0 707 aaKnown RBP9.51□□□□□ -0.89
SDF2-204ENST00000587338 PARP2Q9UGN5 583 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 KCNH3Q9ULD8 1083 aa9.51□□□□□ -0.89
SDF2-204ENST00000587338 MRPS23Q9Y3D9 190 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms