RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 DHX8Q14562 1220 aaKnown RBP19.44■□□□□ 0.7
TPM4-206ENST00000587201 CBX2Q14781 532 aaPredicted RBP19.44■□□□□ 0.7
TPM4-206ENST00000587201 KIAA1841Q6NSI8 718 aa19.44■□□□□ 0.7
TPM4-206ENST00000587201 FAM173BQ6P4H8 233 aa19.44■□□□□ 0.7
TPM4-206ENST00000587201 TAS1R3Q7RTX0 852 aa19.44■□□□□ 0.7
TPM4-206ENST00000587201 SPIRE2Q8WWL2 714 aa19.44■□□□□ 0.7
TPM4-206ENST00000587201 RABGGTAQ92696 567 aa19.44■□□□□ 0.7
TPM4-206ENST00000587201 TARS2Q9BW92 718 aaKnown RBP19.44■□□□□ 0.7
TPM4-206ENST00000587201 DZANK1Q9NVP4 752 aa19.44■□□□□ 0.7
TPM4-206ENST00000587201 CASTOR2A6NHX0 329 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 DCXO43602 365 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 LILRB3O75022 631 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 TADA2AO75478 443 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 MARCKSP29966 332 aaPredicted RBP19.43■□□□□ 0.7
TPM4-206ENST00000587201 GLUD2P49448 558 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 ITIH3Q06033 890 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 STRN3Q13033 797 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 HSP90AA2PQ14568 343 aaPredicted RBP19.43■□□□□ 0.7
TPM4-206ENST00000587201 KARSQ15046 597 aaKnown RBP19.43■□□□□ 0.7
TPM4-206ENST00000587201 ZNF568Q3ZCX4 644 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 CES5AQ6NT32 575 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 FUT10Q6P4F1 479 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 GPBP1Q86WP2 473 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 RNF168Q8IYW5 571 aaPredicted RBP19.43■□□□□ 0.7
TPM4-206ENST00000587201 SLC22A17Q8WUG5 538 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 RPGRIP1Q96KN7 1286 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 NTPCRQ9BSD7 190 aaKnown RBP19.43■□□□□ 0.7
TPM4-206ENST00000587201 TCHPQ9BT92 498 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 CDT1Q9H211 546 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 CXCL16Q9H2A7 254 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 CACNG4Q9UBN1 327 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 ADAM28Q9UKQ2 775 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 MTMR6Q9Y217 621 aa19.43■□□□□ 0.7
TPM4-206ENST00000587201 SPDYE4A6NLX3 237 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 EFEMP2O95967 443 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 PLCG1P19174 1290 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 CLCN4P51793 760 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 YARSP54577 528 aaKnown RBP19.42■□□□□ 0.7
TPM4-206ENST00000587201 DSG1Q02413 1049 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 CEBPZQ03701 1054 aaKnown RBP19.42■□□□□ 0.7
TPM4-206ENST00000587201 PTPAQ15257 358 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 ARSHQ5FYA8 562 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 TMEM31Q5JXX7 168 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 RARS2Q5T160 578 aaKnown RBP19.42■□□□□ 0.7
TPM4-206ENST00000587201 ZBTB33Q86T24 672 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 RNF135Q8IUD6 432 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 C12orf76Q8N812 135 aaPredicted RBP19.42■□□□□ 0.7
TPM4-206ENST00000587201 SNX21Q969T3 373 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 PAAF1Q9BRP4 392 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 CCDC94Q9BW85 323 aaPredicted RBP19.42■□□□□ 0.7
TPM4-206ENST00000587201 GPR62Q9BZJ7 368 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 ADAM7Q9H2U9 754 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 PTPRHQ9HD43 1115 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 BLOC1S4Q9NUP1 217 aa19.42■□□□□ 0.7
TPM4-206ENST00000587201 LARSQ9P2J5 1176 aaKnown RBP19.42■□□□□ 0.7
TPM4-206ENST00000587201 FAM86C2PA6NEL3 165 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 LOC730098B7Z3J9 87 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 STX6O43752 255 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 KRT18P05783 430 aaKnown RBP19.41■□□□□ 0.7
TPM4-206ENST00000587201 GRM5P41594 1212 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 OSTNP61366 133 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 MCM6Q14566 821 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 USP41Q3LFD5 358 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 GLRA4Q5JXX5 417 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 SPECC1Q5M775 1068 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 KIAA0319Q5VV43 1072 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 CEP120Q8N960 986 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 TMEM161BQ8NDZ6 487 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 LRRC15Q8TF66 581 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 HASPINQ8TF76 798 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 RAD54LQ92698 747 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 B3GALT6Q96L58 329 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 ZSCAN16Q9H4T2 348 aaPredicted RBP19.41■□□□□ 0.7
TPM4-206ENST00000587201 CHST7Q9NS84 486 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 CDH22Q9UJ99 828 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 ODF2LQ9ULJ1 636 aa19.41■□□□□ 0.7
TPM4-206ENST00000587201 GPR37L1O60883 481 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 ADH1AP07327 375 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 MAPTP10636 758 aaKnown RBP19.4■□□□□ 0.7
TPM4-206ENST00000587201 MCF2P10911 925 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 HARSP12081 509 aaKnown RBP19.4■□□□□ 0.7
TPM4-206ENST00000587201 COL9A1P20849 921 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 NAB2Q15742 525 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 MPZL3Q6UWV2 235 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 HSCBQ8IWL3 235 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 LARP4BQ92615 738 aaKnown RBP19.4■□□□□ 0.7
TPM4-206ENST00000587201 EPSTI1Q96J88 318 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 FBXL18Q96ME1 805 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 RIPOR3Q96MK2 946 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 NECTIN4Q96NY8 510 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 REEP2Q9BRK0 252 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 LRFN3Q9BTN0 628 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 CCSER1Q9C0I3 900 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 TOPORSQ9NS56 1045 aaPredicted RBP19.4■□□□□ 0.7
TPM4-206ENST00000587201 MUTYHQ9UIF7 546 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 FBXO2Q9UK22 296 aaPredicted RBP19.4■□□□□ 0.7
TPM4-206ENST00000587201 SRPRBQ9Y5M8 271 aaKnown RBP19.4■□□□□ 0.7
TPM4-206ENST00000587201 SF3B1O75533 1304 aaKnown RBP eCLIP19.4■□□□□ 0.76e-8■■■■■ 90.6
TPM4-206ENST00000587201 C5orf42Q9H799 3197 aa19.4■□□□□ 0.7
TPM4-206ENST00000587201 H0YCG3 227 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms