RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 DNM1LO00429 736 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 NTRK1P04629 796 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 GRIA2P42262 883 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 RFX5P48382 616 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 RHBDL3P58872 404 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 MAP4K2Q12851 820 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 SSPNQ14714 243 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 TRIM60Q495X7 471 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 KREMEN2Q8NCW0 462 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 GPRC5AQ8NFJ5 357 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 ALG3Q92685 438 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 CHAMP1Q96JM3 812 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 UHRF1Q96T88 793 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 OSBPL5Q9H0X9 879 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.86□□□□□ -1.156e-7■■■□□ 18.3
PPP4R1-216ENST00000580283 C9orf78Q9NZ63 289 aaPredicted RBP7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 SIRPGQ9P1W8 387 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 DDX20Q9UHI6 824 aaKnown RBP7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 PCDHA5Q9Y5H7 936 aa7.86□□□□□ -1.15
PPP4R1-216ENST00000580283 C22orf46C9J442 243 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 BUB1BO60566 1050 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 ALDH1L1O75891 902 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 IFIT1P09914 478 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 ZSCAN22P10073 491 aaPredicted RBP7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 MAPK4P31152 587 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 CYP2C19P33261 490 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 RGS2P41220 211 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 PICALMQ13492 652 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 SLC9A5Q14940 896 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 PUM3Q15397 648 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 ANO1Q5XXA6 986 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 C16orf59Q7L2K0 433 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 PLEKHH3Q7Z736 793 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 C1QL4Q86Z23 238 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 DCP2Q8IU60 420 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 IGDCC3Q8IVU1 814 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 CCDC103Q8IW40 242 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 TMEM151BQ8IW70 566 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 PLEKHO2Q8TD55 490 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 SOCS4Q8WXH5 440 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 EDC3Q96F86 508 aaKnown RBP7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 LRFN3Q9BTN0 628 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 EPHX3Q9H6B9 360 aa7.85□□□□□ -1.15
PPP4R1-216ENST00000580283 GRXCR1A8MXD5 290 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 PDPK1O15530 556 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 HOXC6P09630 235 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 CYBAP13498 195 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 BCL6P41182 706 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 ADCYAP1R1P41586 468 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 BTDP43251 543 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 PHKA1P46020 1223 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 BACE1P56817 501 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 MRPS5P82675 430 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 TLE2Q04725 743 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 EXOSC9Q06265 439 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 PABPC4Q13310 644 aaKnown RBP eCLIP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 MTERF2Q49AM1 385 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 CEP68Q76N32 757 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 RCBTB1Q8NDN9 531 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 ZNF669Q96BR6 464 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 TSPAN17Q96FV3 270 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 TRMT2BQ96GJ1 504 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 TMEM169Q96HH4 297 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 RNPC3Q96LT9 517 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 AP5M1Q9H0R1 490 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 PRDM12Q9H4Q4 367 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 FAN1Q9Y2M0 1017 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 COA3Q9Y2R0 106 aaPredicted RBP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 MSRB2Q9Y3D2 182 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 PRRC2BQ5JSZ5 2229 aaKnown RBP7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 CFAP54Q96N23 3096 aa7.84□□□□□ -1.15
PPP4R1-216ENST00000580283 FANCIQ9NVI1 1328 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 GPR75-ASB3A0A0A6YYF3 556 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 TRAV20A0A0B4J274 112 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 PRODHO43272 600 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 FPR2P25090 351 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 CNGA1P29973 690 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 ADORA1P30542 326 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 IRX3P78415 501 aaPredicted RBP7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 TFF2Q03403 129 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 RASGRF1Q13972 1273 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 TESK1Q15569 626 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 AKNAD1Q5T1N1 836 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 SLC35F1Q5T1Q4 408 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 TCERG1LQ5VWI1 586 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 CNKSR3Q6P9H4 555 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 SLC4A10Q6U841 1118 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 USP53Q70EK8 1073 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 SIAH1Q8IUQ4 282 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 LPIN2Q92539 896 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 FERMT2Q96AC1 680 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 PAGR1Q9BTK6 254 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 RNF38Q9H0F5 515 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 CCDC113Q9H0I3 377 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 DNAJC18Q9H819 358 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 THEGQ9P2T0 379 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 PCDHA2Q9Y5H9 948 aa7.83□□□□□ -1.16
PPP4R1-216ENST00000580283 MYH1P12882 1939 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms