RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.81□□□□□ -0.527e-8■■■■■ 49.6
CSNK1D-210ENST00000579308 KLK14Q9P0G3 267 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 FBXL21Q9UKT6 434 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 TTLL13PA6NNM8 815 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 JAK2O60674 1132 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 TADA2AO75478 443 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 RPL17P18621 184 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 GBP2P32456 591 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 HSP90AA2PQ14568 343 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 NAB2Q15742 525 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 DIS3L2Q8IYB7 885 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 RIN2Q8WYP3 895 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 PRIMPOLQ96LW4 560 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 CLSTN3Q9BQT9 956 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 CXCL16Q9H2A7 254 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 TUFT1Q9NNX1 390 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 PRMT7Q9NVM4 692 aaPredicted RBP11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 CACNG4Q9UBN1 327 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 PARP2Q9UGN5 583 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 DCHS1Q96JQ0 3298 aa11.8□□□□□ -0.52
CSNK1D-210ENST00000579308 FAM186AA6NE01 2351 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 SPTBN4Q9H254 2564 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 GVINP1Q7Z2Y8 2422 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 PLXNA3P51805 1871 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 POTEMA6NI47 508 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 PTGESO14684 152 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 USO1O60763 962 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 MED24O75448 989 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 ZMYND10O75800 440 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 CFHP08603 1231 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 SRFP11831 508 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 CREMQ03060 361 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 ANGPT1Q15389 498 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 RTP2Q5QGT7 225 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 PRSS55Q6UWB4 352 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 MAEAQ7L5Y9 396 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 MCPH1Q8NEM0 835 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 LNX1Q8TBB1 728 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 BSNDQ8WZ55 320 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 NKD2Q969F2 451 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 NACC1Q96RE7 527 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 POLR3CQ9BUI4 534 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 PDZD7Q9H5P4 517 aa11.79□□□□□ -0.52
CSNK1D-210ENST00000579308 DENND4AQ7Z401 1863 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 LRRIQ4A6NIV6 560 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 CYP11B2P19099 503 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 ATP2B1P20020 1258 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 ST3GAL1Q11201 340 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 TUSC3Q13454 348 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 HTR4Q13639 388 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 PHLDB3Q6NSJ2 640 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 GLYCTKQ8IVS8 523 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 TTPALQ9BTX7 342 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 CCDC113Q9H0I3 377 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 PIDD1Q9HB75 910 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 SLC2A4RGQ9NR83 387 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 SNTG2Q9NY99 539 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 DLGAP2Q9P1A6 1054 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 FBXW11Q9UKB1 542 aa11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 ZFP37Q9Y6Q3 630 aaPredicted RBP11.78□□□□□ -0.52
CSNK1D-210ENST00000579308 SF3B1O75533 1304 aaKnown RBP eCLIP11.78□□□□□ -0.526e-7■■■■■ 43.1
CSNK1D-210ENST00000579308 CASTOR2A6NHX0 329 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 HAX1O00165 279 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 ACKR2O00590 384 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 N4BP3O15049 544 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 ADAM12O43184 909 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 KIF4AO95239 1232 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 EDN1P05305 212 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 THP07101 528 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 HNRNPA1P09651 372 aaKnown RBP eCLIP11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 IGFBP6P24592 240 aaPredicted RBP11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 RPA1P27694 616 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 MCM7P33993 719 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 FAM171A1Q5VUB5 890 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 CD300LGQ6UXG3 332 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 ADSSL1Q8N142 457 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 GPR152Q8TDT2 470 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 CCDC43Q96MW1 224 aaKnown RBP11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 RPP25Q9BUL9 199 aaKnown RBP11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 TBC1D17Q9HA65 648 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 CA14Q9ULX7 337 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 USP20Q9Y2K6 914 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 NUMBLQ9Y6R0 609 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 ZNF292O60281 2723 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 DNAH14Q0VDD8 3507 aa11.77□□□□□ -0.53
CSNK1D-210ENST00000579308 RECQL4O94761 1208 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 POU2F2P09086 479 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 FSHRP23945 695 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 HOXA9P31269 272 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 NAMPTP43490 491 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 FOSBP53539 338 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 FOXK2Q01167 660 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 PRPF4BQ13523 1007 aaKnown RBP11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 RAB33AQ14088 237 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 ECM1Q16610 540 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 MAPK6Q16659 721 aa11.76□□□□□ -0.53
CSNK1D-210ENST00000579308 EEF1DP3Q658K8 133 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms