RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 SCRN1Q12765 414 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 HSP90AA2PQ14568 343 aaPredicted RBP9.49□□□□□ -0.89
CASC3-206ENST00000579238 EARS2Q5JPH6 523 aaKnown RBP9.49□□□□□ -0.89
CASC3-206ENST00000579238 PRSS55Q6UWB4 352 aaPredicted RBP9.49□□□□□ -0.89
CASC3-206ENST00000579238 PJA1Q8NG27 643 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 OXER1Q8TDS5 423 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 RMDN1Q96DB5 314 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 SHDQ96IW2 340 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 CCDC43Q96MW1 224 aaKnown RBP9.49□□□□□ -0.89
CASC3-206ENST00000579238 HSD17B14Q9BPX1 270 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 PDRG1Q9NUG6 133 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 KLK14Q9P0G3 267 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 PARP2Q9UGN5 583 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 CDH7Q9ULB5 785 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 PCDHA12Q9UN75 941 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 TDRD15B5MCY1 1934 aaKnown RBP9.48□□□□□ -0.89
CASC3-206ENST00000579238 ARID2Q68CP9 1835 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 GLULP15104 373 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 HOXA9P31269 272 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 GPC5P78333 572 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 TUSC3Q13454 348 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 RTP2Q5QGT7 225 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 LIN9Q5TKA1 542 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 PPP4R3CPQ6ZMV5 832 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 MTSS1LQ765P7 747 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 GRASPQ7Z6J2 395 aaPredicted RBP9.48□□□□□ -0.89
CASC3-206ENST00000579238 CDR2LQ86X02 465 aaPredicted RBP9.48□□□□□ -0.89
CASC3-206ENST00000579238 KIAA2013Q8IYS2 634 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 PIK3R5Q8WYR1 880 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 RUBCNQ92622 972 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 RABGGTAQ92696 567 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 FGF14Q92915 247 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 BORCS6Q96GS4 357 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 PRIMPOLQ96LW4 560 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 CLSTN3Q9BQT9 956 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 PAAF1Q9BRP4 392 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 TTPALQ9BTX7 342 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 RPP25Q9BUL9 199 aaKnown RBP9.48□□□□□ -0.89
CASC3-206ENST00000579238 FOXQ1Q9C009 403 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 POLR3FQ9H1D9 316 aaPredicted RBP9.48□□□□□ -0.89
CASC3-206ENST00000579238 GJB4Q9NTQ9 266 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 CACNG4Q9UBN1 327 aa9.48□□□□□ -0.89
CASC3-206ENST00000579238 KANSL1LA0AUZ9 987 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 FAM205CA6NFA0 338 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 CASTOR2A6NHX0 329 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 LRRIQ4A6NIV6 560 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 PFKFB2O60825 505 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 XYLBO75191 536 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 THP07101 528 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 C8AP07357 584 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 POU2F2P09086 479 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 XRCC6P12956 609 aaKnown RBP eCLIP9.47□□□□□ -0.89
CASC3-206ENST00000579238 KRT2P35908 639 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 NTHL1P78549 312 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 PRKCQQ04759 706 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 ELAVL2Q12926 359 aaKnown RBP9.47□□□□□ -0.89
CASC3-206ENST00000579238 NR5A1Q13285 461 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 PUM1Q14671 1186 aaKnown RBP eCLIP9.47□□□□□ -0.89
CASC3-206ENST00000579238 PSMD5Q16401 504 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 CALCRLQ16602 461 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 FAM187BQ17R55 369 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 PPM1LQ5SGD2 360 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 FAM171A1Q5VUB5 890 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 PDXDC1Q6P996 788 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 PARM1Q6UWI2 310 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 DGLUCYQ7Z3D6 616 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 CEP57Q86XR8 500 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 ST13P5Q8NFI4 369 aaPredicted RBP9.47□□□□□ -0.89
CASC3-206ENST00000579238 LNX1Q8TBB1 728 aaPredicted RBP9.47□□□□□ -0.89
CASC3-206ENST00000579238 PIGOQ8TEQ8 1089 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 HASPINQ8TF76 798 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 WASF1Q92558 559 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 FGF13Q92913 245 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 TNFRSF25Q93038 417 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 HINFPQ9BQA5 517 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 DDX23Q9BUQ8 820 aaKnown RBP9.47□□□□□ -0.89
CASC3-206ENST00000579238 TTC12Q9H892 705 aaPredicted RBP9.47□□□□□ -0.89
CASC3-206ENST00000579238 BRMS1Q9HCU9 246 aa9.47□□□□□ -0.89
CASC3-206ENST00000579238 PRMT7Q9NVM4 692 aaPredicted RBP9.47□□□□□ -0.89
CASC3-206ENST00000579238 ORC3Q9UBD5 711 aaPredicted RBP9.47□□□□□ -0.89
CASC3-206ENST00000579238 CACNA1IQ9P0X4 2223 aa9.46□□□□□ -0.89
CASC3-206ENST00000579238 POTEMA6NI47 508 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 PTGESO14684 152 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 N4BP3O15049 544 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 CCL16O15467 120 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 NEMFO60524 1076 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 USO1O60763 962 aaKnown RBP9.46□□□□□ -0.9
CASC3-206ENST00000579238 KINO60870 393 aaKnown RBP9.46□□□□□ -0.9
CASC3-206ENST00000579238 LRRN2O75325 713 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 KIF4AO95239 1232 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 CTDNEP1O95476 244 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 MAGEA9P43362 315 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 PFKPQ01813 784 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 SNW1Q13573 536 aaKnown RBP9.46□□□□□ -0.9
CASC3-206ENST00000579238 RAB33AQ14088 237 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 MLF2Q15773 248 aaPredicted RBP9.46□□□□□ -0.9
CASC3-206ENST00000579238 UVSSAQ2YD98 709 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 ZNF528Q3MIS6 628 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 SLC44A4Q53GD3 710 aa9.46□□□□□ -0.9
CASC3-206ENST00000579238 CDCA2Q69YH5 1023 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms