RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 PRSS55Q6UWB4 352 aaPredicted RBP23.28■■□□□ 1.32
TSEN54-205ENST00000578415 PIGOQ8TEQ8 1089 aa23.28■■□□□ 1.32
TSEN54-205ENST00000578415 ARHGEF3Q9NR81 526 aa23.28■■□□□ 1.32
TSEN54-205ENST00000578415 DLGAP2Q9P1A6 1054 aa23.28■■□□□ 1.32
TSEN54-205ENST00000578415 PARP2Q9UGN5 583 aa23.28■■□□□ 1.32
TSEN54-205ENST00000578415 NUMBLQ9Y6R0 609 aa23.28■■□□□ 1.32
TSEN54-205ENST00000578415 EP300Q09472 2414 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-205ENST00000578415 TADA2AO75478 443 aa23.27■■□□□ 1.32
TSEN54-205ENST00000578415 RFX1P22670 979 aa23.27■■□□□ 1.32
TSEN54-205ENST00000578415 ID4P47928 161 aa23.27■■□□□ 1.32
TSEN54-205ENST00000578415 CREMQ03060 361 aa23.27■■□□□ 1.32
TSEN54-205ENST00000578415 HSP90AA2PQ14568 343 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-205ENST00000578415 PHLDB3Q6NSJ2 640 aa23.27■■□□□ 1.32
TSEN54-205ENST00000578415 TTC12Q9H892 705 aaPredicted RBP23.27■■□□□ 1.32
TSEN54-205ENST00000578415 GPRC5CQ9NQ84 441 aa23.27■■□□□ 1.32
TSEN54-205ENST00000578415 SLC2A4RGQ9NR83 387 aa23.27■■□□□ 1.32
TSEN54-205ENST00000578415 SF3B1O75533 1304 aaKnown RBP eCLIP23.27■■□□□ 1.32
TSEN54-205ENST00000578415 TDRD15B5MCY1 1934 aaKnown RBP23.26■■□□□ 1.31
TSEN54-205ENST00000578415 USO1O60763 962 aaKnown RBP23.26■■□□□ 1.31
TSEN54-205ENST00000578415 DCNP07585 359 aaKnown RBP23.26■■□□□ 1.31
TSEN54-205ENST00000578415 PPP4R3CPQ6ZMV5 832 aa23.26■■□□□ 1.31
TSEN54-205ENST00000578415 ERMP1Q7Z2K6 904 aa23.26■■□□□ 1.31
TSEN54-205ENST00000578415 CCDC43Q96MW1 224 aaKnown RBP23.26■■□□□ 1.31
TSEN54-205ENST00000578415 FBXW11Q9UKB1 542 aa23.26■■□□□ 1.31
TSEN54-205ENST00000578415 R4GN57 208 aa23.26■■□□□ 1.31
TSEN54-205ENST00000578415 TUSC3Q13454 348 aa23.25■■□□□ 1.31
TSEN54-205ENST00000578415 SPECC1Q5M775 1068 aa23.25■■□□□ 1.31
TSEN54-205ENST00000578415 HASPINQ8TF76 798 aa23.25■■□□□ 1.31
TSEN54-205ENST00000578415 WASF1Q92558 559 aa23.25■■□□□ 1.31
TSEN54-205ENST00000578415 CLSTN3Q9BQT9 956 aa23.25■■□□□ 1.31
TSEN54-205ENST00000578415 RPP25Q9BUL9 199 aaKnown RBP23.25■■□□□ 1.31
TSEN54-205ENST00000578415 ZNF292O60281 2723 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 CASTOR2A6NHX0 329 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 LRRIQ4A6NIV6 560 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 TTLL13PA6NNM8 815 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 PTGESO14684 152 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 KIF4AO95239 1232 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 LMNAP02545 664 aaKnown RBP23.24■■□□□ 1.31
TSEN54-205ENST00000578415 FSHRP23945 695 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 TXKP42681 527 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 CDCA2Q69YH5 1023 aaPredicted RBP23.24■■□□□ 1.31
TSEN54-205ENST00000578415 DCLRE1AQ6PJP8 1040 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 MAEAQ7L5Y9 396 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 GRASPQ7Z6J2 395 aaPredicted RBP23.24■■□□□ 1.31
TSEN54-205ENST00000578415 LNX1Q8TBB1 728 aaPredicted RBP23.24■■□□□ 1.31
TSEN54-205ENST00000578415 PIK3R5Q8WYR1 880 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 MTMR9Q96QG7 549 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 TTPALQ9BTX7 342 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 CXCL16Q9H2A7 254 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 SEMA4AQ9H3S1 761 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 FZD8Q9H461 694 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 BRMS1Q9HCU9 246 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 SIT1Q9Y3P8 196 aa23.24■■□□□ 1.31
TSEN54-205ENST00000578415 POTEMA6NI47 508 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 NEMFO60524 1076 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 SPATA31C1P0DKV0 1188 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 XRCC6P12956 609 aaKnown RBP eCLIP23.23■■□□□ 1.31
TSEN54-205ENST00000578415 GLULP15104 373 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 NTHL1P78549 312 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 FAM187BQ17R55 369 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 FAM171A1Q5VUB5 890 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 PARM1Q6UWI2 310 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 KCNG4Q8TDN1 519 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 FGF14Q92915 247 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 PRIMPOLQ96LW4 560 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 FOXQ1Q9C009 403 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 PDZD7Q9H5P4 517 aa23.23■■□□□ 1.31
TSEN54-205ENST00000578415 PRMT7Q9NVM4 692 aaPredicted RBP23.23■■□□□ 1.31
TSEN54-205ENST00000578415 ZFP37Q9Y6Q3 630 aaPredicted RBP23.23■■□□□ 1.31
TSEN54-205ENST00000578415 CACNA1AO00555 2505 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 MTCL1Q9Y4B5 1905 aaKnown RBP23.22■■□□□ 1.31
TSEN54-205ENST00000578415 BTBD18B2RXH4 712 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 ADAM12O43184 909 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 NAB2Q15742 525 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 CEP57Q86XR8 500 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 NECAB1Q8N987 351 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 PJA1Q8NG27 643 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 CDH7Q9ULB5 785 aa23.22■■□□□ 1.31
TSEN54-205ENST00000578415 WDR87Q6ZQQ6 2873 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 RECQL4O94761 1208 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 C8AP07357 584 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 HNRNPA1P09651 372 aaKnown RBP eCLIP23.21■■□□□ 1.31
TSEN54-205ENST00000578415 SP9P0CG40 484 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 STARD6P59095 220 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 GPC5P78333 572 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 PSMD5Q16401 504 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 LIN9Q5TKA1 542 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 C1orf210Q8IVY1 113 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 BSNDQ8WZ55 320 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 TMEM60Q9H2L4 133 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 SNTG2Q9NY99 539 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 USP20Q9Y2K6 914 aa23.21■■□□□ 1.31
TSEN54-205ENST00000578415 LRRN2O75325 713 aa23.2■■□□□ 1.3
TSEN54-205ENST00000578415 LARGE1O95461 756 aa23.2■■□□□ 1.3
TSEN54-205ENST00000578415 THP07101 528 aa23.2■■□□□ 1.3
TSEN54-205ENST00000578415 PPM1LQ5SGD2 360 aa23.2■■□□□ 1.3
TSEN54-205ENST00000578415 CATSPER3Q86XQ3 398 aa23.2■■□□□ 1.3
TSEN54-205ENST00000578415 ZBTB8OSQ8IWT0 167 aa23.2■■□□□ 1.3
TSEN54-205ENST00000578415 DIS3L2Q8IYB7 885 aaKnown RBP23.2■■□□□ 1.3
TSEN54-205ENST00000578415 MCPH1Q8NEM0 835 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms