RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 MEFVO15553 781 aaPredicted RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 CALUO43852 315 aaPredicted RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 EXTL3O43909 919 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 RECQL4O94761 1208 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 NR3C1P04150 777 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 CLTAP09496 248 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 ATP2A2P16615 1042 aaKnown RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 ERCC5P28715 1186 aaPredicted RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 PMS1P54277 932 aaKnown RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 MCCD1P59942 119 aaPredicted RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 ZSCAN23Q3MJ62 389 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 CLLU1OSQ5K130 101 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 SASS6Q6UVJ0 657 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 ALKAL1Q6UXT8 129 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 CHRDL2Q6WN34 429 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 LRRC55Q6ZSA7 311 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 ZBTB33Q86T24 672 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 HERC6Q8IVU3 1022 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 TMEM192Q8IY95 271 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 SP7Q8TDD2 431 aaPredicted RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 SNX27Q96L92 541 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 CCDC94Q9BW85 323 aaPredicted RBP13.85□□□□□ -0.19
MKS1-206ENST00000577824 RSAD1Q9HA92 442 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 ANO10Q9NW15 660 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 CNTN3Q9P232 1028 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 RWDD2AQ9UIY3 292 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 HES2Q9Y543 173 aa13.85□□□□□ -0.19
MKS1-206ENST00000577824 PDCD11Q14690 1871 aaKnown RBP13.84□□□□□ -0.19
MKS1-206ENST00000577824 TTC26A0AVF1 554 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 ITGA4P13612 1032 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 TYRO3Q06418 890 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 ENOX2Q16206 610 aaKnown RBP13.84□□□□□ -0.19
MKS1-206ENST00000577824 ZBTB41Q5SVQ8 909 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 BRSK2Q8IWQ3 736 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 GPD1LQ8N335 351 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 XXYLT1Q8NBI6 393 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 GSTCDQ8NEC7 633 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 NELFBQ8WX92 580 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 MED15Q96RN5 788 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 TMEM117Q9H0C3 514 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 RNF39Q9H2S5 420 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 PLEKHA5Q9HAU0 1116 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 TOPORSQ9NS56 1045 aaPredicted RBP13.84□□□□□ -0.19
MKS1-206ENST00000577824 SNTG2Q9NY99 539 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 PCDHB7Q9Y5E2 793 aa13.84□□□□□ -0.19
MKS1-206ENST00000577824 FNDC1Q4ZHG4 1894 aaPredicted RBP13.84□□□□□ -0.19
MKS1-206ENST00000577824 SYCE3A1L190 88 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 TRIM49BA6NDI0 452 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 CLIC2O15247 247 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 SLC16A3O15427 465 aaKnown RBP13.83□□□□□ -0.2
MKS1-206ENST00000577824 OFD1O75665 1012 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 CCDC192P0DO97 292 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 FGFR1P11362 822 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 HARSP12081 509 aaKnown RBP13.83□□□□□ -0.2
MKS1-206ENST00000577824 KCNE1P15382 129 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 NR2F2P24468 414 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 RPL13P26373 211 aaKnown RBP13.83□□□□□ -0.2
MKS1-206ENST00000577824 MLH1P40692 756 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 TNFSF9P41273 254 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 MATR3P43243 847 aaKnown RBP eCLIP13.83□□□□□ -0.2
MKS1-206ENST00000577824 FKBP3Q00688 224 aaKnown RBP13.83□□□□□ -0.2
MKS1-206ENST00000577824 ENPEPQ07075 957 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 ANKRD40Q6AI12 368 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 GLB1LQ6UWU2 654 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 THNSL1Q8IYQ7 743 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 CMTR2Q8IYT2 770 aaKnown RBP13.83□□□□□ -0.2
MKS1-206ENST00000577824 ZSWIM2Q8NEG5 633 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 LPPQ93052 612 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 SAAL1Q96ER3 474 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 ACAP3Q96P50 834 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 CASD1Q96PB1 797 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 TSPAN18Q96SJ8 248 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 TSG101Q99816 390 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 DUSP9Q99956 384 aaKnown RBP13.83□□□□□ -0.2
MKS1-206ENST00000577824 MKNK1Q9BUB5 465 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 LRFN2Q9ULH4 789 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 CTNND2Q9UQB3 1225 aa13.83□□□□□ -0.2
MKS1-206ENST00000577824 ANK1P16157 1881 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 ARL5CA6NH57 179 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 PTGESO14684 152 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 LINC00271P0C7V0 271 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 CXCL8P10145 99 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 AKAP5P24588 427 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 ACOT2P49753 483 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 YARSP54577 528 aaKnown RBP13.82□□□□□ -0.2
MKS1-206ENST00000577824 NAB2Q15742 525 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 SNRNP35Q16560 246 aaKnown RBP13.82□□□□□ -0.2
MKS1-206ENST00000577824 SLC10A6Q3KNW5 377 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 LRIT3Q3SXY7 679 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 FAM109BQ6ICB4 259 aaPredicted RBP13.82□□□□□ -0.2
MKS1-206ENST00000577824 KLHL10Q6JEL2 608 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 C11orf57Q6ZUT1 292 aaPredicted RBP13.82□□□□□ -0.2
MKS1-206ENST00000577824 CD302Q8IX05 232 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 HELQQ8TDG4 1101 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 CEP63Q96MT8 703 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 RAD9AQ99638 391 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 BPIFA3Q9BQP9 254 aa13.82□□□□□ -0.2
MKS1-206ENST00000577824 FAM213AQ9BRX8 229 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms