RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 TMEM31Q5JXX7 168 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 CABP7Q86V35 215 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 RNF135Q8IUD6 432 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 LRRC15Q8TF66 581 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 NECTIN4Q96NY8 510 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 ACO2Q99798 780 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 LRFN3Q9BTN0 628 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 EMILIN2Q9BXX0 1053 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 CXCL16Q9H2A7 254 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 KMT5AQ9NQR1 393 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 PDCD11Q14690 1871 aaKnown RBP13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 ZNF318Q5VUA4 2279 aa13.69□□□□□ -0.22
CSNK1D-206ENST00000577578 MYO10Q9HD67 2058 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 MUC6Q6W4X9 2439 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 VPS37CA5D8V6 355 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 CCDC169A6NNP5 214 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 ABLIM1O14639 778 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 PLS3P13797 630 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 LIG1P18858 919 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 UBA7P41226 1012 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 GLUD2P49448 558 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 GRIN1Q05586 938 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 RESTQ13127 1097 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 HSP90AA2PQ14568 343 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 PTPAQ15257 358 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 ZRSR1Q15695 479 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 TMEM132AQ24JP5 1023 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 ARSHQ5FYA8 562 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 XKR4Q5GH76 650 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 FUT10Q6P4F1 479 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 TAS1R1Q7RTX1 841 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 APBB1IPQ7Z5R6 666 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 CDK5RAP3Q96JB5 506 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 PAAF1Q9BRP4 392 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 MRPL4Q9BYD3 311 aaKnown RBP13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 GPR62Q9BZJ7 368 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 CDT1Q9H211 546 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 ADAM28Q9UKQ2 775 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 MORC2Q9Y6X9 1032 aaPredicted RBP13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
CSNK1D-206ENST00000577578 SFI1A8K8P3 1242 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 TEX28O15482 410 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 PAPLNO95428 1278 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 SSBP05455 408 aaKnown RBP eCLIP13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 THP07101 528 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 MAPTP10636 758 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 COL9A1P20849 921 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 CA8P35219 290 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 GRM5P41594 1212 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 KIAA1841Q6NSI8 718 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 CES5AQ6NT32 575 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 ALKAL1Q6UXT8 129 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 ZPBP2Q6X784 338 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 TMEM87AQ8NBN3 555 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 TMEM161BQ8NDZ6 487 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 SNX21Q969T3 373 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 CALML4Q96GE6 196 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 FBXL18Q96ME1 805 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 PPP1R10Q96QC0 940 aaKnown RBP13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 PLIN2Q99541 437 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 CCSER1Q9C0I3 900 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 MUTYHQ9UIF7 546 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 MTMR6Q9Y217 621 aa13.67□□□□□ -0.22
CSNK1D-206ENST00000577578 SF3B1O75533 1304 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 ZDBF2Q9HCK1 2354 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 PRR33A8MZF0 331 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 TMEM189-UBE2V1I3L0A0 370 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 SLC16A4O15374 487 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 KIF4AO95239 1232 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 ADH1AP07327 375 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 MCF2P10911 925 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 SCP2P22307 547 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 KLRC2P26717 231 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 MTHFRP42898 656 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 ZNF131P52739 623 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 SMTNP53814 917 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 USP41Q3LFD5 358 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 ZNF568Q3ZCX4 644 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 CEP120Q8N960 986 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 CMASQ8NFW8 434 aaPredicted RBP13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 REEP2Q9BRK0 252 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 TARS2Q9BW92 718 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 APOL5Q9BWW9 433 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 RHOBTB2Q9BYZ6 727 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 POMKQ9H5K3 350 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 SFXN1Q9H9B4 322 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 FNIP2Q9P278 1114 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 LARSQ9P2J5 1176 aaKnown RBP13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 CACNG4Q9UBN1 327 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 GDAQ9Y2T3 454 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 CLIC4Q9Y696 253 aa13.66□□□□□ -0.22
CSNK1D-206ENST00000577578 FAM86C2PA6NEL3 165 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms