RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 NRP1O14786 923 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
SMG6-216ENST00000575176 CUTAO60888 179 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 TOM1L1O75674 476 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 KIF4AO95239 1232 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 PAPLNO95428 1278 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 SSBP05455 408 aaKnown RBP eCLIP9.53□□□□□ -0.88
SMG6-216ENST00000575176 ADRB2P07550 413 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 CTSAP10619 480 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 ADSSP30520 456 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 WNT7BP56706 349 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 ADAM15Q13444 863 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 STK38Q15208 465 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 LEXMQ3ZCV2 418 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 ZC2HC1CQ53FD0 456 aaPredicted RBP9.53□□□□□ -0.88
SMG6-216ENST00000575176 TJAP1Q5JTD0 557 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 ATL3Q6DD88 541 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 MPZL3Q6UWV2 235 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 TAS1R1Q7RTX1 841 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 HAUS6Q7Z4H7 955 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 DDX53Q86TM3 631 aaKnown RBP9.53□□□□□ -0.88
SMG6-216ENST00000575176 THNSL1Q8IYQ7 743 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 ABI1Q8IZP0 508 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 EFHBQ8N7U6 833 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 AUTS2Q8WXX7 1259 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 CDK5RAP3Q96JB5 506 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 NECAB3Q96P71 396 aaPredicted RBP9.53□□□□□ -0.88
SMG6-216ENST00000575176 HERC2P3Q9BVR0 1158 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 APOL6Q9BWW8 343 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 MRPL4Q9BYD3 311 aaKnown RBP9.53□□□□□ -0.88
SMG6-216ENST00000575176 TRIM9Q9C026 710 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 PARVGQ9HBI0 331 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 CD320Q9NPF0 282 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 OLFML3Q9NRN5 406 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 CNTN3Q9P232 1028 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 TBX20Q9UMR3 447 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 COG5Q9UP83 839 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 PCDHB12Q9Y5F1 795 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 STYXL1Q9Y6J8 313 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 COL4A2P08572 1712 aa9.53□□□□□ -0.88
SMG6-216ENST00000575176 DMDP11532 3685 aa9.52□□□□□ -0.88
SMG6-216ENST00000575176 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 ANKRD63C9JTQ0 380 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 H3BQ06 376 aaPredicted RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 K7ENM7 598 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 K7ERI5 159 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 MCF2P10911 925 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 PDIA4P13667 645 aaKnown RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 IL9P15248 144 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 LIG1P18858 919 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 CASP1P29466 404 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 TNFSF9P41273 254 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 NRIP1P48552 1158 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 DHX8Q14562 1220 aaKnown RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 NOLC1Q14978 699 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMG6-216ENST00000575176 SLC10A6Q3KNW5 377 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 ZNF568Q3ZCX4 644 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 SEZ6Q53EL9 994 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 GLRA4Q5JXX5 417 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 RRAGBQ5VZM2 374 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 PLPP4Q5VZY2 271 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 SYCE2Q6PIF2 218 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 CRELD2Q6UXH1 353 aaPredicted RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 TMEM184AQ6ZMB5 413 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 EPM2AIP1Q7L775 607 aaPredicted RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 PDILTQ8N807 584 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 SMRP1Q8NCR6 262 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 ZSWIM2Q8NEG5 633 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 RABGGTAQ92696 567 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 STAMQ92783 540 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 KHSRPQ92945 711 aaKnown RBP eCLIP9.52□□□□□ -0.89
SMG6-216ENST00000575176 HLA-CQ95604 372 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 HPS3Q969F9 1004 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 ZNF396Q96N95 335 aaPredicted RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 TCF25Q9BQ70 676 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 GBP3Q9H0R5 595 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 TNMDQ9H2S6 317 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 GOLPH3LQ9H4A5 285 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 GOLGA2P5Q9HBQ8 144 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 UBN1Q9NPG3 1134 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 AAASQ9NRG9 546 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 CHST7Q9NS84 486 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 CDH22Q9UJ99 828 aa9.52□□□□□ -0.89
SMG6-216ENST00000575176 KIF26AQ9ULI4 1882 aaPredicted RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 BARX2Q9UMQ3 279 aaPredicted RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 RBM19Q9Y4C8 960 aaKnown RBP9.52□□□□□ -0.89
SMG6-216ENST00000575176 KMT2EQ8IZD2 1858 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 DENND4CQ5VZ89 1909 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 A0A0B4J269 797 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 SMIM28A0A1B0GU29 152 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 TTC26A0AVF1 554 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 TMEM189-UBE2V1I3L0A0 370 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 PER2O15055 1255 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 KLRC4O43908 158 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 TRAK2O60296 914 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 CLASP2O75122 1294 aaKnown RBP9.51□□□□□ -0.89
SMG6-216ENST00000575176 SOD2P04179 222 aa9.51□□□□□ -0.89
SMG6-216ENST00000575176 CXCL8P10145 99 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms