RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 C12orf76Q8N812 135 aaPredicted RBP33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 CXCL16Q9H2A7 254 aa33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 DAXXQ9UER7 740 aaPredicted RBP33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 ADAM28Q9UKQ2 775 aa33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 RBM19Q9Y4C8 960 aaKnown RBP33.36■■■□□ 2.93
CTDNEP1-206ENST00000571409 THP07101 528 aa33.35■■■□□ 2.93
CTDNEP1-206ENST00000571409 CLCN4P51793 760 aa33.35■■■□□ 2.93
CTDNEP1-206ENST00000571409 FUT10Q6P4F1 479 aa33.35■■■□□ 2.93
CTDNEP1-206ENST00000571409 TAS1R3Q7RTX0 852 aa33.35■■■□□ 2.93
CTDNEP1-206ENST00000571409 APBB1IPQ7Z5R6 666 aaPredicted RBP33.35■■■□□ 2.93
CTDNEP1-206ENST00000571409 ACO2Q99798 780 aaKnown RBP33.35■■■□□ 2.93
CTDNEP1-206ENST00000571409 RAPGEFL1Q9UHV5 662 aa33.35■■■□□ 2.93
CTDNEP1-206ENST00000571409 CASTOR2A6NHX0 329 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 SLC16A4O15374 487 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 SLC26A4O43511 780 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 UBA7P41226 1012 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 HERC4Q5GLZ8 1057 aaPredicted RBP33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 KIAA0319Q5VV43 1072 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 KIAA1841Q6NSI8 718 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 CALML4Q96GE6 196 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 PAAF1Q9BRP4 392 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 MRPL4Q9BYD3 311 aaKnown RBP33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 GPR62Q9BZJ7 368 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 KCND2Q9NZV8 630 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 MYH11P35749 1972 aa33.34■■■□□ 2.93
CTDNEP1-206ENST00000571409 DSG1Q02413 1049 aa33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 GRIN1Q05586 938 aa33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 HSP90AA2PQ14568 343 aaPredicted RBP33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 KANK3Q6NY19 840 aa33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 INTS4Q96HW7 963 aaKnown RBP33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 FBXL18Q96ME1 805 aa33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 NECTIN4Q96NY8 510 aa33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 TARS2Q9BW92 718 aaKnown RBP33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 CHST7Q9NS84 486 aa33.33■■■□□ 2.93
CTDNEP1-206ENST00000571409 TADA2AO75478 443 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 WEE2P0C1S8 567 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 PLS3P13797 630 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 SYT1P21579 422 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 LONP1P36776 959 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 NAB2Q15742 525 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 ZNF568Q3ZCX4 644 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 B3GALT6Q96L58 329 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 RIPOR3Q96MK2 946 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 NTPCRQ9BSD7 190 aaKnown RBP33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 CDT1Q9H211 546 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 POMKQ9H5K3 350 aa33.32■■■□□ 2.92
CTDNEP1-206ENST00000571409 SPDYE4A6NLX3 237 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 PRR33A8MZF0 331 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 ADH1AP07327 375 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 SP100P23497 879 aaPredicted RBP33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 MTHFRP42898 656 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 USP41Q3LFD5 358 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 SPIRE2Q8WWL2 714 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 PTPRHQ9HD43 1115 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 FOXD4L1Q9NU39 408 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 KCNG1Q9UIX4 513 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 CLIC4Q9Y696 253 aa33.31■■■□□ 2.92
CTDNEP1-206ENST00000571409 NPHP3-ACAD11A0A0J9YXS1 232 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 K7ELQ4 463 aaPredicted RBP33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 TEX28O15482 410 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 SMTNP53814 917 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 CACNB1Q02641 598 aaPredicted RBP33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 RESTQ13127 1097 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 ARSHQ5FYA8 562 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 CEP120Q8N960 986 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 HASPINQ8TF76 798 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 SFXN1Q9H9B4 322 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 RXFP1Q9HBX9 757 aa33.3■■■□□ 2.92
CTDNEP1-206ENST00000571409 SF3B1O75533 1304 aaKnown RBP eCLIP33.29■■■□□ 2.921e-8■■■■■ 60.3
CTDNEP1-206ENST00000571409 PLXNA3P51805 1871 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 GRM5P41594 1212 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 GLRA4Q5JXX5 417 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 TMC5Q6UXY8 1006 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 ZBTB33Q86T24 672 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 TMEM161BQ8NDZ6 487 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 RASSF8Q8NHQ8 419 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 LRRC15Q8TF66 581 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 TSHZ2Q9NRE2 1034 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 NR2E1Q9Y466 385 aa33.29■■■□□ 2.92
CTDNEP1-206ENST00000571409 KIF4AO95239 1232 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 PLCG1P19174 1290 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 OSTNP61366 133 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 STRN3Q13033 797 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 DHX8Q14562 1220 aaKnown RBP33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 KARSQ15046 597 aaKnown RBP33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 ATAT1Q5SQI0 421 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 GPBP1Q86WP2 473 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 TCHPQ9BT92 498 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 CCDC94Q9BW85 323 aaPredicted RBP33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 BLOC1S4Q9NUP1 217 aa33.28■■■□□ 2.92
CTDNEP1-206ENST00000571409 PROZP22891 400 aa33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 YARSP54577 528 aaKnown RBP33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 PTPAQ15257 358 aa33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 FAM173BQ6P4H8 233 aa33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 FEZF2Q8TBJ5 459 aa33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 RIN2Q8WYP3 895 aaPredicted RBP33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 PPP1R10Q96QC0 940 aaKnown RBP33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 MAN1C1Q9NR34 630 aa33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP33.27■■■□□ 2.92
CTDNEP1-206ENST00000571409 LARSQ9P2J5 1176 aaKnown RBP33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms