RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 POMGNT1Q8WZA1 660 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 SLC9A7Q96T83 725 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 TRAIPQ9BWF2 469 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 NXF3Q9H4D5 531 aaKnown RBP12.54□□□□□ -0.4
KARS-207ENST00000566560 PTPRHQ9HD43 1115 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 TYW1Q9NV66 732 aaKnown RBP12.54□□□□□ -0.4
KARS-207ENST00000566560 CXXC1Q9P0U4 656 aaPredicted RBP12.54□□□□□ -0.4
KARS-207ENST00000566560 IPPQ9Y573 584 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 PCDHB2Q9Y5E7 798 aa12.54□□□□□ -0.4
KARS-207ENST00000566560 PDCD11Q14690 1871 aaKnown RBP12.53□□□□□ -0.4
KARS-207ENST00000566560 A0A0U1RQF3 1178 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 PSMA7O14818 248 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 ATF7P17544 494 aaPredicted RBP12.53□□□□□ -0.4
KARS-207ENST00000566560 PRCPP42785 496 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 SHHQ15465 462 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 DPCR1Q3MIW9 517 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 SLFN12LQ6IEE8 588 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 KLHL10Q6JEL2 608 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 SASS6Q6UVJ0 657 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 HACE1Q8IYU2 909 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 CEP120Q8N960 986 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 ZBTB45Q96K62 511 aaPredicted RBP12.53□□□□□ -0.4
KARS-207ENST00000566560 CBWD1Q9BRT8 395 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 MSTO1Q9BUK6 570 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 APOL6Q9BWW8 343 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 KCTD10Q9H3F6 313 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 AGPAT3Q9NRZ7 376 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 TMEM161AQ9NX61 479 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 LRFN2Q9ULH4 789 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 CTNND2Q9UQB3 1225 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 HES2Q9Y543 173 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 SLC4A7Q9Y6M7 1214 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 ANK1P16157 1881 aa12.53□□□□□ -0.4
KARS-207ENST00000566560 FNDC1Q4ZHG4 1894 aaPredicted RBP12.53□□□□□ -0.4
KARS-207ENST00000566560 COL4A6Q14031 1691 aa12.52□□□□□ -0.4
KARS-207ENST00000566560 A0A0B4J269 797 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 TGFB1I1O43294 461 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 STAG3L1P0CL83 205 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 ATP2A2P16615 1042 aaKnown RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 GARTP22102 1010 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 FECHP22830 423 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 ADSSP30520 456 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 BMP8BP34820 402 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 NLRP12P59046 1061 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 SNRPFP62306 86 aaKnown RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 STX1AQ16623 288 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 RASIP1Q5U651 963 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 PRPF38BQ5VTL8 546 aaKnown RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 TMCO2Q7Z6W1 182 aaPredicted RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 TDHQ8IZJ6 230 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 ADSSL1Q8N142 457 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 SMG8Q8ND04 991 aaKnown RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 LPPQ93052 612 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 PGBD4Q96DM1 585 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 CCDC94Q9BW85 323 aaPredicted RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 HAPLN2Q9GZV7 340 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 ELAC1Q9H777 363 aaKnown RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 DACH1Q9UI36 760 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 PCDHB7Q9Y5E2 793 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 STYXL1Q9Y6J8 313 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 TDRD15B5MCY1 1934 aaKnown RBP12.52□□□□□ -0.41
KARS-207ENST00000566560 TRIP11Q15643 1979 aa12.52□□□□□ -0.41
KARS-207ENST00000566560 TRIOBPQ9H2D6 2365 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 SYCE3A1L190 88 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 PDXKO00764 312 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 OGTO15294 1046 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 HOXA2O43364 376 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 ZNF623O75123 536 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 RECQL4O94761 1208 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 UPP2O95045 317 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 FGFR1P11362 822 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 ITGA4P13612 1032 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 GRM5P41594 1212 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 CYP2J2P51589 502 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 PRSS12P56730 875 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 OSTNP61366 133 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 PAK1Q13153 545 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 ZCWPW2Q504Y3 356 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 ZNF598Q86UK7 904 aaKnown RBP12.51□□□□□ -0.41
KARS-207ENST00000566560 THNSL1Q8IYQ7 743 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 MLKLQ8NB16 471 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 NOC3LQ8WTT2 800 aaKnown RBP12.51□□□□□ -0.41
KARS-207ENST00000566560 NELFBQ8WX92 580 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 P2RX5Q93086 422 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 SAAL1Q96ER3 474 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 DHTKD1Q96HY7 919 aaPredicted RBP12.51□□□□□ -0.41
KARS-207ENST00000566560 TSG101Q99816 390 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 RSAD1Q9HA92 442 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 SNTG2Q9NY99 539 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 HSPBP1Q9NZL4 362 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 AGO2Q9UKV8 859 aaKnown RBP12.51□□□□□ -0.41
KARS-207ENST00000566560 KIAA1671Q9BY89 1806 aa12.51□□□□□ -0.41
KARS-207ENST00000566560 BICDL2A1A5D9 508 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 TRIM49BA6NDI0 452 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 MEIS3P2A8K0S8 358 aa12.5□□□□□ -0.41
KARS-207ENST00000566560 KIAA0391O15091 583 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms