RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 ANKS1AQ92625 1134 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 TMX3Q96JJ7 454 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 DIRC2Q96SL1 478 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 UHRF1Q96T88 793 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 MCOLN1Q9GZU1 580 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 NSUN3Q9H649 340 aaKnown RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 C14orf93Q9H972 538 aaKnown RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 KIAA1586Q9HCI6 787 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 TLR9Q9NR96 1032 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 TRMT13Q9NUP7 481 aaKnown RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 CORO2BQ9UQ03 480 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 SNX13Q9Y5W8 968 aa6.19□□□□□ -1.42
CNOT1-209ENST00000566240 MYBBP1AQ9BQG0 1328 aaKnown RBP6.19□□□□□ -1.42
CNOT1-209ENST00000566240 KPNA5O15131 536 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 ALDH1A2O94788 518 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 KLHL18O94889 574 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 PAPLNO95428 1278 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 HMGCRP04035 888 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 AMY1AP04745 511 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 MALP21145 153 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 SMARCA1P28370 1054 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 IL13P35225 146 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 ETV4P43268 484 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 LIMS1P48059 325 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 EPHB3P54753 998 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 TLE1Q04724 770 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 SNAPC2Q13487 334 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 ANO1Q5XXA6 986 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 CLEC14AQ86T13 490 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 MYLK4Q86YV6 388 aaPredicted RBP6.18□□□□□ -1.42
CNOT1-209ENST00000566240 ZGPATQ8N5A5 531 aaKnown RBP6.18□□□□□ -1.42
CNOT1-209ENST00000566240 POF1BQ8WVV4 589 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 PPM1EQ8WY54 764 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 ZCCHC14Q8WYQ9 949 aaKnown RBP6.18□□□□□ -1.42
CNOT1-209ENST00000566240 SGPP1Q9BX95 441 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 EPB41L4BQ9H329 900 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 KCNK12Q9HB15 430 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 TRPS1Q9UHF7 1281 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 USP19O94966 1318 aa6.18□□□□□ -1.42
CNOT1-209ENST00000566240 GASTP01350 101 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 KITP10721 976 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 TNFSF4P23510 183 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 PAX3P23760 479 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 WNT3AP56704 352 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 ADAM15Q13444 863 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 RAPGEF1Q13905 1077 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 PRR31Q5SQ13 230 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 PRR23BQ6ZRT6 265 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 RTKN2Q8IZC4 609 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 ANKRD42Q8N9B4 389 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 PLA2G15Q8NCC3 412 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 FAM168AQ92567 244 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 HERPUD2Q9BSE4 406 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 LDAHQ9H6V9 325 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 ZNF287Q9HBT7 754 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 ARFGAP3Q9NP61 516 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 LANCL2Q9NS86 450 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 ING3Q9NXR8 418 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 GPRC5DQ9NZD1 345 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 CPA4Q9UI42 421 aa6.17□□□□□ -1.42
CNOT1-209ENST00000566240 C2orf78A6NCI8 922 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 ISM1B1AKI9 464 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 MYO1FO00160 1098 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 FOXN3O00409 490 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-209ENST00000566240 DDCP20711 480 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 SLC7A1P30825 629 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 CRHR1P34998 444 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 HALP42357 657 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 KIR2DL3P43628 341 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 MEOX1P50221 254 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 ATP8B2P98198 1209 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 FMO1Q01740 532 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 ZNF543Q08ER8 600 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 CNGA2Q16280 664 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 TMEM95Q3KNT9 176 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 FLYWCH1Q4VC44 716 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 FAM209BQ5JX69 171 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 DGKKQ5KSL6 1271 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 LARP4Q71RC2 724 aaKnown RBP eCLIP6.16□□□□□ -1.42
CNOT1-209ENST00000566240 LILRA3Q8N6C8 439 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-209ENST00000566240 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 MYRIPQ8NFW9 859 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 SENP6Q9GZR1 1112 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-209ENST00000566240 WDCPQ9H6R7 721 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 SARS2Q9NP81 518 aaKnown RBP6.16□□□□□ -1.42
CNOT1-209ENST00000566240 STARD7Q9NQZ5 370 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 TMEM140Q9NV12 185 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 FEZ2Q9UHY8 353 aaPredicted RBP6.16□□□□□ -1.42
CNOT1-209ENST00000566240 OGDHLQ9ULD0 1010 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 LRCH1Q9Y2L9 728 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 PCDHA1Q9Y5I3 950 aa6.16□□□□□ -1.42
CNOT1-209ENST00000566240 ADCY6O43306 1168 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 NCK2O43639 380 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 NBNO60934 754 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 SEMA7AO75326 666 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 GPR32O75388 356 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 ITGA10O75578 1167 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 FGAP02671 866 aa6.15□□□□□ -1.42
CNOT1-209ENST00000566240 FTH1P19P0C7X4 201 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms