RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 LRCH3Q96II8 777 aa16.12■□□□□ 0.17
SPG7-213ENST00000566221 FBXL18Q96ME1 805 aa16.12■□□□□ 0.17
SPG7-213ENST00000566221 FAM213AQ9BRX8 229 aa16.12■□□□□ 0.17
SPG7-213ENST00000566221 MKNK1Q9BUB5 465 aa16.12■□□□□ 0.17
SPG7-213ENST00000566221 NXF3Q9H4D5 531 aaKnown RBP16.12■□□□□ 0.17
SPG7-213ENST00000566221 FRMD4BQ9Y2L6 1034 aa16.12■□□□□ 0.17
SPG7-213ENST00000566221 IPPQ9Y573 584 aa16.12■□□□□ 0.17
SPG7-213ENST00000566221 COL6A3P12111 3177 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 FSD2A1L4K1 749 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 GOLGA8IPA6NC78 632 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 GOLGA6L3A6NEY3 463 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 GOLGA8JA6NMD2 632 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 SMTNL1A8MU46 457 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 RBAK-RBAKDNI3L0D1 243 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 SOX1O00570 391 aaPredicted RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 MAPK13O15264 365 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 STAG3L1P0CL83 205 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 EPB41P11171 864 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 POU5F1Q01860 360 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 SNRNP35Q16560 246 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 CEP135Q66GS9 1140 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 MRPL10Q7Z7H8 261 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 RTN4RL1Q86UN2 441 aaPredicted RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 ECHDC2Q86YB7 292 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 FAM114A1Q8IWE2 563 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 CEP120Q8N960 986 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 SMG8Q8ND04 991 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 PGBD4Q96DM1 585 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 SRRTQ9BXP5 876 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 THAP9Q9H5L6 903 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 CBX8Q9HC52 389 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 CPSF3Q9UKF6 684 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 NFE2L3Q9Y4A8 694 aa16.11■□□□□ 0.17
SPG7-213ENST00000566221 RANBP2P49792 3224 aaKnown RBP16.11■□□□□ 0.17
SPG7-213ENST00000566221 GBF1Q92538 1859 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.1■□□□□ 0.17
SPG7-213ENST00000566221 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 BECN2A8MW95 431 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ENPP3O14638 875 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 GNA14O95837 355 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 EOMESO95936 686 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 FGBP02675 491 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ITGA4P13612 1032 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ATF7P17544 494 aaPredicted RBP16.1■□□□□ 0.17
SPG7-213ENST00000566221 PSMC2P35998 433 aaKnown RBP16.1■□□□□ 0.17
SPG7-213ENST00000566221 TNFSF9P41273 254 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 CASP4P49662 377 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ACOT2P49753 483 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 YARSP54577 528 aaKnown RBP16.1■□□□□ 0.17
SPG7-213ENST00000566221 IQCB1Q15051 598 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ZBTB41Q5SVQ8 909 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 BRSK2Q8IWQ3 736 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 DHX40Q8IX18 779 aaKnown RBP16.1■□□□□ 0.17
SPG7-213ENST00000566221 FAM186BQ8IYM0 893 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ZSWIM2Q8NEG5 633 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ACAP3Q96P50 834 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 PRO3102Q9H379 93 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 ELAC1Q9H777 363 aaKnown RBP16.1■□□□□ 0.17
SPG7-213ENST00000566221 TOPORSQ9NS56 1045 aaPredicted RBP16.1■□□□□ 0.17
SPG7-213ENST00000566221 TMEM161AQ9NX61 479 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 HES2Q9Y543 173 aa16.1■□□□□ 0.17
SPG7-213ENST00000566221 AKAP3O75969 853 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 RECQL4O94761 1208 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 AMHP03971 560 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 ADRB2P07550 413 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 CXCL8P10145 99 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 MAGEA10P43363 369 aaPredicted RBP16.09■□□□□ 0.17
SPG7-213ENST00000566221 KCNJ6P48051 423 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 EPHB4P54760 987 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 OSTNP61366 133 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 WDR5P61964 334 aaKnown RBP16.09■□□□□ 0.17
SPG7-213ENST00000566221 TPM4P67936 248 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 FAM189BP81408 668 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 NCAPHQ15003 741 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 SEZ6Q53EL9 994 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 CRELD2Q6UXH1 353 aaPredicted RBP16.09■□□□□ 0.17
SPG7-213ENST00000566221 ZNF365Q70YC5 407 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 ZNF598Q86UK7 904 aaKnown RBP16.09■□□□□ 0.17
SPG7-213ENST00000566221 CBWD2Q8IUF1 395 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 NPAS4Q8IUM7 802 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 EEF2KMTQ96G04 330 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.09■□□□□ 0.178e-12■■■□□ 15.2
SPG7-213ENST00000566221 APOL6Q9BWW8 343 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 MTIF3Q9H2K0 278 aaKnown RBP16.09■□□□□ 0.17
SPG7-213ENST00000566221 RPF1Q9H9Y2 349 aaKnown RBP16.09■□□□□ 0.17
SPG7-213ENST00000566221 UBN1Q9NPG3 1134 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 SNTG2Q9NY99 539 aa16.09■□□□□ 0.17
SPG7-213ENST00000566221 RBAKQ9NYW8 714 aaPredicted RBP16.09■□□□□ 0.17
SPG7-213ENST00000566221 KIAA1671Q9BY89 1806 aa16.08■□□□□ 0.17
SPG7-213ENST00000566221 IL18RAPO95256 599 aa16.08■□□□□ 0.16
SPG7-213ENST00000566221 IBSPP21815 317 aaPredicted RBP16.08■□□□□ 0.16
SPG7-213ENST00000566221 MRE11P49959 708 aa16.08■□□□□ 0.16
SPG7-213ENST00000566221 MARSP56192 900 aaKnown RBP16.08■□□□□ 0.16
SPG7-213ENST00000566221 PPP2R3AQ06190 1150 aa16.08■□□□□ 0.16
SPG7-213ENST00000566221 CYP24A1Q07973 514 aa16.08■□□□□ 0.16
SPG7-213ENST00000566221 ENOX2Q16206 610 aaKnown RBP16.08■□□□□ 0.16
SPG7-213ENST00000566221 UVSSAQ2YD98 709 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms