RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 WDR44Q5JSH3 913 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 TCEAL6Q6IPX3 200 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 MAP4K3Q8IVH8 894 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 TCEAL3Q969E4 200 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 KIF12Q96FN5 646 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 ZFP42Q96MM3 310 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 NLRP4Q96MN2 994 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 SH2D3AQ9BRG2 576 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 ZNF334Q9HCZ1 680 aaPredicted RBP18.66■□□□□ 0.58
CLK3-217ENST00000566126 UBN1Q9NPG3 1134 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 TRPV5Q9NQA5 729 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 SUCLA2Q9P2R7 463 aaPredicted RBP18.66■□□□□ 0.58
CLK3-217ENST00000566126 TCEAL9Q9UHQ7 104 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 EML5Q05BV3 1969 aa18.66■□□□□ 0.58
CLK3-217ENST00000566126 TMEM150BA6NC51 233 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 WDR64B1ANS9 1081 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 ADAM12O43184 909 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 CYP3A4P08684 503 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 ITGA4P13612 1032 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 CEBPBP17676 345 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 CCNE1P24864 410 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 HOXA6P31267 233 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 ADCY7P51828 1080 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 NAPAP54920 295 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 AP3B2Q13367 1082 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 MTERF2Q49AM1 385 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 SH3PXD2AQ5TCZ1 1133 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 Q6ZS52 159 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 KBTBD6Q86V97 674 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 TEX2Q8IWB9 1127 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 MB21D2Q8IYB1 491 aaPredicted RBP18.65■□□□□ 0.58
CLK3-217ENST00000566126 RABGGTAQ92696 567 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 IRF7Q92985 503 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 TRMT61BQ9BVS5 477 aaKnown RBP18.65■□□□□ 0.58
CLK3-217ENST00000566126 MINDY3Q9H8M7 445 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 DISC1Q9NRI5 854 aa18.65■□□□□ 0.58
CLK3-217ENST00000566126 VWA8A3KMH1 1905 aa18.64■□□□□ 0.58
CLK3-217ENST00000566126 NR1I2O75469 434 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 MPLP40238 635 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 DNM2P50570 870 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 AXDND1Q5T1B0 1012 aaPredicted RBP18.64■□□□□ 0.57
CLK3-217ENST00000566126 CACNA2D4Q7Z3S7 1137 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 LNX1Q8TBB1 728 aaPredicted RBP18.64■□□□□ 0.57
CLK3-217ENST00000566126 GAB3Q8WWW8 586 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 NIFKQ9BYG3 293 aaKnown RBP18.64■□□□□ 0.57
CLK3-217ENST00000566126 IPPQ9Y573 584 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 PCDHGA5Q9Y5G8 931 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 U3KPZ7 1027 aaPredicted RBP18.64■□□□□ 0.57
CLK3-217ENST00000566126 NAV2Q8IVL1 2488 aa18.64■□□□□ 0.57
CLK3-217ENST00000566126 C4orf47A7E2U8 309 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 HIP1O00291 1037 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 STBD1O95210 358 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 RHOP08100 348 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 SETQ01105 290 aaPredicted RBP18.63■□□□□ 0.57
CLK3-217ENST00000566126 TMTC3Q6ZXV5 915 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 RAB11FIP4Q86YS3 637 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 GSTCDQ8NEC7 633 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 PIK3R5Q8WYR1 880 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 EDEM2Q9BV94 578 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 EIF2AQ9BY44 585 aaKnown RBP18.63■□□□□ 0.57
CLK3-217ENST00000566126 VPS45Q9NRW7 570 aa18.63■□□□□ 0.57
CLK3-217ENST00000566126 GDI1P31150 447 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 PSMD5Q16401 504 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 UVSSAQ2YD98 709 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 FAM78AQ5JUQ0 283 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 PPP1R18Q6NYC8 613 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 VITQ6UXI7 678 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 PDZD3Q86UT5 571 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 CNNM3Q8NE01 707 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 LNPKQ9C0E8 428 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 ZFP14Q9HCL3 533 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 CACNG4Q9UBN1 327 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 SEPT9Q9UHD8 586 aaPredicted RBP18.62■□□□□ 0.57
CLK3-217ENST00000566126 GPSM3Q9Y4H4 160 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 NEUROG3Q9Y4Z2 214 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 HES2Q9Y543 173 aa18.62■□□□□ 0.57
CLK3-217ENST00000566126 SMCO2A6NFE2 343 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 CEACAM1P13688 526 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 LRRC32Q14392 662 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 JAKMIP3Q5VZ66 844 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 KIAA1211LQ6NV74 962 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 C19orf48Q6RUI8 117 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 BBC3Q96PG8 261 aaPredicted RBP18.61■□□□□ 0.57
CLK3-217ENST00000566126 PAAF1Q9BRP4 392 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 TTPALQ9BTX7 342 aa18.61■□□□□ 0.57
CLK3-217ENST00000566126 AVENQ9NQS1 362 aaPredicted RBP18.61■□□□□ 0.57
CLK3-217ENST00000566126 SF3B1O75533 1304 aaKnown RBP eCLIP18.6■□□□□ 0.57
CLK3-217ENST00000566126 CYSRT1A8MQ03 144 aa18.6■□□□□ 0.57
CLK3-217ENST00000566126 ARNTLO00327 626 aa18.6■□□□□ 0.57
CLK3-217ENST00000566126 MAFO75444 373 aaPredicted RBP18.6■□□□□ 0.57
CLK3-217ENST00000566126 TADA2AO75478 443 aa18.6■□□□□ 0.57
CLK3-217ENST00000566126 RPP40O75818 363 aaKnown RBP18.6■□□□□ 0.57
CLK3-217ENST00000566126 CAPNS1P04632 268 aa18.6■□□□□ 0.57
CLK3-217ENST00000566126 PTH1RQ03431 593 aa18.6■□□□□ 0.57
CLK3-217ENST00000566126 LENG9Q96B70 501 aa18.6■□□□□ 0.57
CLK3-217ENST00000566126 NCANO14594 1321 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 CNTNAP5Q8WYK1 1306 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 ADAMTS3O15072 1205 aa18.59■□□□□ 0.57
CLK3-217ENST00000566126 HYAL3O43820 417 aaPredicted RBP18.59■□□□□ 0.57
CLK3-217ENST00000566126 PSMC3P17980 439 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms