RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 PSMA7O14818 248 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 OGTO15294 1046 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 INPPL1O15357 1258 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 CALUO43852 315 aaPredicted RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 NPTXRO95502 500 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 LDHAP00338 332 aaKnown RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 ERCC5P28715 1186 aaPredicted RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 DPCR1Q3MIW9 517 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 XKR4Q5GH76 650 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 AGMOQ6ZNB7 445 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 HS2ST1Q7LGA3 356 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 NPAS4Q8IUM7 802 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 ZC3H3Q8IXZ2 948 aaKnown RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 MYRIPQ8NFW9 859 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 POMGNT1Q8WZA1 660 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 P2RX5Q93086 422 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 ZNF689Q96CS4 500 aaPredicted RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 MED15Q96RN5 788 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 CBWD1Q9BRT8 395 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 MSTO1Q9BUK6 570 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 MTIF3Q9H2K0 278 aaKnown RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 UBN1Q9NPG3 1134 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 CPSF3Q9UKF6 684 aaKnown RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 AGO2Q9UKV8 859 aaKnown RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 GIT1Q9Y2X7 761 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 R3HCC1Q9Y3T6 440 aaKnown RBP13.76□□□□□ -0.21
SF3B3-206ENST00000565990 PCDHB7Q9Y5E2 793 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 SLC4A7Q9Y6M7 1214 aa13.76□□□□□ -0.21
SF3B3-206ENST00000565990 MEFVO15553 781 aaPredicted RBP13.75□□□□□ -0.21
SF3B3-206ENST00000565990 DGKIO75912 1065 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 STAG3L1P0CL83 205 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 ITGA4P13612 1032 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 PMS1P54277 932 aaKnown RBP13.75□□□□□ -0.21
SF3B3-206ENST00000565990 DEFB103AP81534 67 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 LRRC63Q05C16 580 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 TMEM132AQ24JP5 1023 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 ZNF568Q3ZCX4 644 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 TTI2Q6NXR4 508 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 GSTCDQ8NEC7 633 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 UBE2Q2Q8WVN8 375 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 RSPH1Q8WYR4 309 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 SLC9A7Q96T83 725 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 DUSP9Q99956 384 aaKnown RBP13.75□□□□□ -0.21
SF3B3-206ENST00000565990 TRIM6Q9C030 488 aaPredicted RBP13.75□□□□□ -0.21
SF3B3-206ENST00000565990 PLEKHA5Q9HAU0 1116 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
SF3B3-206ENST00000565990 KIAA1586Q9HCI6 787 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 RNF19AQ9NV58 838 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 SNTG2Q9NY99 539 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 HSPBP1Q9NZL4 362 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 ANKFY1Q9P2R3 1169 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 RWDD2AQ9UIY3 292 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 HES2Q9Y543 173 aa13.75□□□□□ -0.21
SF3B3-206ENST00000565990 PDCD11Q14690 1871 aaKnown RBP13.75□□□□□ -0.21
SF3B3-206ENST00000565990 TDRD15B5MCY1 1934 aaKnown RBP13.74□□□□□ -0.21
SF3B3-206ENST00000565990 MEIS3P2A8K0S8 358 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 CLIC2O15247 247 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 EXTL3O43909 919 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 NR3C1P04150 777 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 CLTAP09496 248 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 RPL13P26373 211 aaKnown RBP13.74□□□□□ -0.21
SF3B3-206ENST00000565990 KCNJ6P48051 423 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 HTRA4P83105 476 aaPredicted RBP13.74□□□□□ -0.21
SF3B3-206ENST00000565990 ADAM9Q13443 819 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 SLC10A6Q3KNW5 377 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 ARMCX5Q6P1M9 558 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 TMEM192Q8IY95 271 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 THNSL1Q8IYQ7 743 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 HACE1Q8IYU2 909 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 GPD1LQ8N335 351 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 CEP120Q8N960 986 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 XXYLT1Q8NBI6 393 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 ZSWIM2Q8NEG5 633 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 KIAA1524Q8TCG1 905 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 NELFBQ8WX92 580 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 ACAP3Q96P50 834 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 TSPAN18Q96SJ8 248 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 NXF3Q9H4D5 531 aaKnown RBP13.74□□□□□ -0.21
SF3B3-206ENST00000565990 PCIF1Q9H4Z3 704 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 ANO10Q9NW15 660 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 DACH1Q9UI36 760 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 GBF1Q92538 1859 aa13.74□□□□□ -0.21
SF3B3-206ENST00000565990 COL4A6Q14031 1691 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 UQCRHLA0A096LP55 91 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 TTC26A0AVF1 554 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 BICDL2A1A5D9 508 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 MAPK13O15264 365 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 HOXA2O43364 376 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 GJB5O95377 273 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 UQCRHP07919 91 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 AKAP5P24588 427 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 TNFSF9P41273 254 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 ACOT2P49753 483 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 FKBP3Q00688 224 aaKnown RBP13.73□□□□□ -0.21
SF3B3-206ENST00000565990 PAK1Q13153 545 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 STX1AQ16623 288 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 CLLU1OSQ5K130 101 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 HERC6Q8IVU3 1022 aa13.73□□□□□ -0.21
SF3B3-206ENST00000565990 CD302Q8IX05 232 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms