RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 MINDY3Q9H8M7 445 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 PRDM6Q9NQX0 595 aa20.75■□□□□ 0.91
CSPG4P13-201ENST00000565545 N4BP1O75113 896 aaKnown RBP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 EDN1P05305 212 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 ACRP10323 421 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 CSF2RAP15509 400 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 SFPQP23246 707 aaKnown RBP eCLIP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 MATR3P43243 847 aaKnown RBP eCLIP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 ZNF200P98182 395 aaPredicted RBP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 MCL1Q07820 350 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 NCBP1Q09161 790 aaKnown RBP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 ITGA7Q13683 1181 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 DCAF17Q5H9S7 520 aaPredicted RBP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 FAM47CQ5HY64 1035 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 GDF6Q6KF10 455 aaPredicted RBP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 MPZL3Q6UWV2 235 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 SERINC5Q86VE9 423 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 RDH13Q8NBN7 331 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 PPM1EQ8WY54 764 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 GAS2L1Q99501 681 aaPredicted RBP20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 TCHPQ9BT92 498 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 PTPRHQ9HD43 1115 aa20.74■□□□□ 0.91
CSPG4P13-201ENST00000565545 GOLGA8IPA6NC78 632 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 GOLGA8JA6NMD2 632 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 GRXCR1A8MXD5 290 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 P4HA2O15460 535 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 ERLIN2O94905 339 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 CRYBB1P53674 252 aaPredicted RBP20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 POU5F1Q01860 360 aaKnown RBP20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 AMHR2Q16671 573 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 KYAT1Q16773 422 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 TMEM132AQ24JP5 1023 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 KIZQ2M2Z5 673 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 TJAP1Q5JTD0 557 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 TMEM240Q5SV17 173 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 C16orf59Q7L2K0 433 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 APBB1IPQ7Z5R6 666 aaPredicted RBP20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 CBWD2Q8IUF1 395 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 USP38Q8NB14 1042 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 SAAL1Q96ER3 474 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 ZNF668Q96K58 619 aaPredicted RBP20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 ZBTB45Q96K62 511 aaPredicted RBP20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 PCMTD1Q96MG8 357 aaPredicted RBP20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 EDEM3Q9BZQ6 932 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 ANKFY1Q9P2R3 1169 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 SIK3Q9Y2K2 1263 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 GRIN2DO15399 1336 aa20.73■□□□□ 0.91
CSPG4P13-201ENST00000565545 AKR1B15C9JRZ8 316 aaPredicted RBP20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 M0QZ92 97 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 ABLIM1O14639 778 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 OGTO15294 1046 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 PMM2O15305 246 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 NRDCO43847 1150 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 ADRB2P07550 413 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 IQCF3P0C7M6 154 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 DARSP14868 501 aaKnown RBP20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 EIF4BP23588 611 aaKnown RBP20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 AXLP30530 894 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 GTF2H1P32780 548 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 PBX2P40425 430 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 CYP24A1Q07973 514 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 NOLC1Q14978 699 aaKnown RBP eCLIP20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 PTPN21Q16825 1174 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 PSRC1Q6PGN9 363 aaPredicted RBP20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 ZNF365Q70YC5 407 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 CNGA4Q8IV77 575 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 LRRC8AQ8IWT6 810 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 PPP1R13LQ8WUF5 828 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 CCDC51Q96ER9 411 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 FAM213AQ9BRX8 229 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 HAPLN2Q9GZV7 340 aa20.72■□□□□ 0.91
CSPG4P13-201ENST00000565545 A0A1W2PQJ5 194 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 MCF2P10911 925 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 TRIM21P19474 475 aaKnown RBP20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 FMO5P49326 533 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 MRPS6P82932 125 aaKnown RBP20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 RBL2Q08999 1139 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 CETN1Q12798 172 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 PSMD6Q15008 389 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 SURF1Q15526 300 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 PTGISQ16647 500 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 GBP6Q6ZN66 633 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 FAM126BQ8IXS8 530 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 SLC43A3Q8NBI5 491 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 ZSWIM2Q8NEG5 633 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 PARD3BQ8TEW8 1205 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 PPP1R16BQ96T49 567 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 PBX4Q9BYU1 374 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 CELF4Q9BZC1 486 aaKnown RBP20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 USP20Q9Y2K6 914 aa20.71■□□□□ 0.91
CSPG4P13-201ENST00000565545 A0A1B0GUA9 196 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 TTLL13PA6NNM8 815 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 B4GALT5O43286 388 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 TSPAN1O60635 241 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 GYPCP04921 128 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 ARF4P18085 180 aaPredicted RBP20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 CYP2C18P33260 490 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 TMEM62Q0P6H9 643 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 KCNMA1Q12791 1236 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 PTK7Q13308 1070 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms