RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 DCDC2CA8MYV0 355 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 SLC16A4O15374 487 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 SMAD1Q15797 465 aaKnown RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 ARHGAP27Q6ZUM4 889 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 SCFD1Q8WVM8 642 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 MCM8Q9UJA3 840 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 GJA3Q9Y6H8 435 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 ABCB11O95342 1321 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 AKAP3O75969 853 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 BMP3P12645 472 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 DRD4P21917 467 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 KIF22Q14807 665 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 SBK1Q52WX2 424 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 ERMARDQ5T6L9 678 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 LVRNQ6Q4G3 990 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 PADI6Q6TGC4 694 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 MREGQ8N565 214 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 TTC25Q96NG3 672 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 SERPINB12Q96P63 405 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 INPP4AQ96PE3 977 aaPredicted RBP13.4□□□□□ -0.26
COMMD4-209ENST00000564068 THTPAQ9BU02 230 aa13.4□□□□□ -0.26
COMMD4-209ENST00000564068 B2RBV5 119 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 MCF2LO15068 1137 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 AP1G2O75843 785 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 SERPINB2P05120 415 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 MAGEA4P43358 317 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 PTENP60484 403 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 THEMIS2Q5TEJ8 643 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 NME8Q8N427 588 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 NKX2-3Q8TAU0 364 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 FAM20AQ96MK3 541 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 NEU2Q9Y3R4 380 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 TTLL3Q9Y4R7 772 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 IPO5O00410 1097 aaKnown RBP13.39□□□□□ -0.27
COMMD4-209ENST00000564068 TLR3O15455 904 aaKnown RBP13.39□□□□□ -0.27
COMMD4-209ENST00000564068 SNUPNO95149 360 aaKnown RBP13.39□□□□□ -0.27
COMMD4-209ENST00000564068 ANXA13P27216 316 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 POLR2BP30876 1174 aaKnown RBP13.39□□□□□ -0.27
COMMD4-209ENST00000564068 TRIML2Q8N7C3 387 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 AIPL1Q9NZN9 384 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 KRT37O76014 449 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 MMP10P09238 476 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 C2CD6Q53TS8 623 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 ATG16L1Q676U5 607 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 WDR75Q8IWA0 830 aaKnown RBP13.39□□□□□ -0.27
COMMD4-209ENST00000564068 BAP1Q92560 729 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 MAGED2Q9UNF1 606 aaPredicted RBP13.39□□□□□ -0.27
COMMD4-209ENST00000564068 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
COMMD4-209ENST00000564068 MX2P20592 715 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 FGFR2P21802 821 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 KLRK1P26718 216 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 RPL21P46778 160 aaKnown RBP13.38□□□□□ -0.27
COMMD4-209ENST00000564068 NOP14P78316 857 aaKnown RBP13.38□□□□□ -0.27
COMMD4-209ENST00000564068 THOC5Q13769 683 aaKnown RBP13.38□□□□□ -0.27
COMMD4-209ENST00000564068 TMEM270Q6UE05 265 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 KCNK18Q7Z418 384 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 RHPN2Q8IUC4 686 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 CPA5Q8WXQ8 436 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 TSSK1BQ9BXA7 367 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 TMEM117Q9H0C3 514 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 RXFP1Q9HBX9 757 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 GRIN2DO15399 1336 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 VHLP40337 213 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 ASPHQ12797 758 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 SYDE2Q5VT97 1194 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 AADACL2Q6P093 401 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 ZNF662Q6ZS27 426 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 ZNF34Q8IZ26 560 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 LRRC43Q8N309 656 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 KCTD6Q8NC69 237 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 NLRP7Q8WX94 980 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 CEP170P1Q96L14 293 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 ZSWIM1Q9BR11 485 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 BLOC1S4Q9NUP1 217 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 PNMA3Q9UL41 463 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 DCCP43146 1447 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 SNX3O60493 162 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 UPP2O95045 317 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 DEUP1Q05D60 604 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 NLRP9Q7RTR0 991 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 NT5DC3Q86UY8 548 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 CCDC125Q86Z20 511 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 RHOT1Q8IXI2 618 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 LRGUKQ96M69 825 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 SMYD2Q9NRG4 433 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 GGA2Q9UJY4 613 aa13.38□□□□□ -0.27
COMMD4-209ENST00000564068 TNFRSF8P28908 595 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 ALDH18A1P54886 795 aaKnown RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 AP3B2Q13367 1082 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 KRT80Q6KB66 452 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 POTEAQ6S8J7 498 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 MORC4Q8TE76 937 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 SMG5Q9UPR3 1016 aaKnown RBP13.37□□□□□ -0.27
COMMD4-209ENST00000564068 GINS2Q9Y248 185 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 H3BRJ5 948 aa13.37□□□□□ -0.27
COMMD4-209ENST00000564068 DDX3XO00571 662 aaKnown RBP eCLIP13.37□□□□□ -0.273e-7■■□□□ 12.4
COMMD4-209ENST00000564068 RIPK2O43353 540 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms