RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 RUFY3Q7L099 469 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 ARMCX2Q7L311 632 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 MICU3Q86XE3 530 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 SLITRK4Q8IW52 837 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 FANCBQ8NB91 859 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 MORC4Q8TE76 937 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 CHMP4CQ96CF2 233 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 RRP36Q96EU6 259 aaKnown RBP9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 KREMEN1Q96MU8 473 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 HTATIP2Q9BUP3 242 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 CPVLQ9H3G5 476 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 CARS2Q9HA77 564 aaKnown RBP9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 VTA1Q9NP79 307 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 MBNL3Q9NUK0 354 aaKnown RBP9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 GPATCH2Q9NW75 528 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 CYP46A1Q9Y6A2 500 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 TRANK1O15050 2925 aa9.2□□□□□ -0.94
NSMCE1-205ENST00000563512 SZT2Q5T011 3432 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 PTPDC1A2A3K4 754 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 DNM1LO00429 736 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 RGS13O14921 159 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 CYTH3O43739 400 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 RARBP10826 455 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 EN2P19622 333 aaPredicted RBP9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 EDNRBP24530 442 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 ALDH5A1P51649 535 aaPredicted RBP9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 HSD17B4P51659 736 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 SNAP25P60880 206 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 OVOS1Q6IE37 1185 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 SLC30A10Q6XR72 485 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 CCDC144CPQ8IYA2 1237 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 ARRDC4Q8NCT1 418 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 TRPV1Q8NER1 839 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 Q96M66 194 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 ASPNQ9BXN1 380 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 LRRC2Q9BYS8 371 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 PRDM7Q9NQW5 492 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 DDX41Q9UJV9 622 aaKnown RBP9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 PCDHA1Q9Y5I3 950 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 ASTN1O14525 1302 aa9.19□□□□□ -0.94
NSMCE1-205ENST00000563512 KLF18A0A0U1RQI7 1052 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 GOLGA8AA7E2F4 631 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 GOLGA8BA8MQT2 603 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 DUSP11O75319 330 aaKnown RBP9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 SNAI1O95863 264 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 TFRCP02786 760 aaKnown RBP9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 JUNBP17275 347 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 CNGA1P29973 690 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 CNTN2Q02246 1040 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 ACVR2BQ13705 512 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 BAATQ14032 418 aaPredicted RBP9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 FRMPD4Q14CM0 1322 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 SLC35G1Q2M3R5 365 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 Q6ZUG5 572 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 NECAB2Q7Z6G3 386 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 HOMER1Q86YM7 354 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 DTWD2Q8NBA8 298 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 NSUN6Q8TEA1 469 aaKnown RBP9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 PIGSQ96S52 555 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 IWS1Q96ST2 819 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 MYL10Q9BUA6 226 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 KATNBL1Q9H079 304 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 ADAMTS6Q9UKP5 1117 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 FAM184BQ9ULE4 1060 aa9.18□□□□□ -0.94
NSMCE1-205ENST00000563512 SIP14410 1827 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 KBTBD13C9JR72 458 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 PPP1R11O60927 126 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 PLEKHA8P1O95397 391 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 COL6A1P12109 1028 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 CALML3P27482 149 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 CST5P28325 142 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 METAP2P50579 478 aaKnown RBP eCLIP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 RNF4P78317 190 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 NKX3-2P78367 333 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 NLRC3Q7RTR2 1065 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 TMPRSS7Q7RTY8 843 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 FAM177A1Q8N128 213 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 LRRN4CLQ8ND94 238 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 BRF1Q92994 677 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 ASIC4Q96FT7 647 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 TCEANC2Q96MN5 208 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 FERD3LQ96RJ6 166 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 GLT8D2Q9H1C3 349 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 UPF3AQ9H1J1 476 aaKnown RBP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 ALDH8A1Q9H2A2 487 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 VAT1LQ9HCJ6 419 aa9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 ZHX1Q9UKY1 873 aaPredicted RBP9.17□□□□□ -0.94
NSMCE1-205ENST00000563512 SYNRGQ9UMZ2 1314 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 TCHHQ07283 1943 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 NKRFO15226 690 aaKnown RBP eCLIP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 STAM2O75886 525 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 IMPDH2P12268 514 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 RXRAP19793 462 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 RACK1P63244 317 aaKnown RBP9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 ANKRD1Q15327 319 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 CCDC144BQ3MJ40 725 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 CDCP2Q5VXM1 449 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 FBXW10Q5XX13 1052 aa9.16□□□□□ -0.94
NSMCE1-205ENST00000563512 RNF180Q86T96 592 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms