RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 SCNN1GP51170 649 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SMTNP53814 917 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 PEX3P56589 373 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RAD51AP2Q09MP3 1159 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 STRN3Q13033 797 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 COASYQ13057 564 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SMAD2Q15796 467 aaKnown RBP10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ECM1Q16610 540 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ARL6IP4Q66PJ3 421 aaKnown RBP10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CDCA2Q69YH5 1023 aaPredicted RBP10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ELMSAN1Q6PJG2 1045 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CABP7Q86V35 215 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 PPFIBP1Q86W92 1011 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 AUTS2Q8WXX7 1259 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ZFP42Q96MM3 310 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TCHPQ9BT92 498 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 KIFC3Q9BVG8 833 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 COLEC11Q9BWP8 271 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 BACH2Q9BYV9 841 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 KMT5AQ9NQR1 393 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 MRPL17Q9NRX2 175 aaKnown RBP10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 KCNG1Q9UIX4 513 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SSX2IPQ9Y2D8 614 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 PHLPP2Q6ZVD8 1323 aa10.24□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ACKR2O00590 384 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 HIP1RO75146 1068 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TADA2AO75478 443 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CTSAP10619 480 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 HOXB8P17481 243 aaPredicted RBP10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 YARSP54577 528 aaKnown RBP10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RBM10P98175 930 aaKnown RBP10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ZP2Q05996 745 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 GRIK3Q13003 919 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 DHX8Q14562 1220 aaKnown RBP10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 AMHR2Q16671 573 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 DCAF4L1Q3SXM0 396 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ATF7IP2Q5U623 682 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ANKRD54Q6NXT1 300 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ZBTB33Q86T24 672 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TMEM173Q86WV6 379 aaPredicted RBP10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SMRP1Q8NCR6 262 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 BSNDQ8WZ55 320 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 MSLNLQ96KJ4 702 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RPGRIP1Q96KN7 1286 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 AK8Q96MA6 479 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TIPINQ9BVW5 301 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 FZD8Q9H461 694 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 PDZD7Q9H5P4 517 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CLEC1BQ9P126 229 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 GDAQ9Y2T3 454 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 USP15Q9Y4E8 981 aaPredicted RBP10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 BDP1A6H8Y1 2624 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 MYO7AQ13402 2215 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TDRD15B5MCY1 1934 aaKnown RBP10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TTC28Q96AY4 2481 aa10.23□□□□□ -0.77
CHRFAM7A-204ENST00000562729 BRWD1Q9NSI6 2320 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CLASP2O75122 1294 aaKnown RBP10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 GLP2RO95838 553 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TXLNAP40222 546 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 AFF1P51825 1210 aaKnown RBP10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SF3A1Q15459 793 aaKnown RBP10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 IL17AQ16552 155 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 FAM187BQ17R55 369 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ZNF568Q3ZCX4 644 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TMEM31Q5JXX7 168 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RINT1Q6NUQ1 792 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 HSCBQ8IWL3 235 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 COLGALT2Q8IYK4 626 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 BICD1Q96G01 975 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 MRPL4Q9BYD3 311 aaKnown RBP10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ZBP1Q9H171 429 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ZHX3Q9H4I2 956 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TOPORSQ9NS56 1045 aaPredicted RBP10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 DZANK1Q9NVP4 752 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SNTG2Q9NY99 539 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RBM19Q9Y4C8 960 aaKnown RBP10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 HCFC2Q9Y5Z7 792 aa10.22□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SFI1A8K8P3 1242 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 H0YCG3 227 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 K7ELQ4 463 aaPredicted RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SLC16A4O15374 487 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 DCXO43602 365 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TBCAO75347 108 aaKnown RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RECQL4O94761 1208 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SOD2P04179 222 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 THP07101 528 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ADH1AP07327 375 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 PLA2G4BP0C869 781 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 HARSP12081 509 aaKnown RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 SP100P23497 879 aaPredicted RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 LONP1P36776 959 aaKnown RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 NPTX2P47972 431 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 GLUD2P49448 558 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 OSTNP61366 133 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CEBPZQ03701 1054 aaKnown RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ITIH3Q06033 890 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CUL4AQ13619 759 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CBX2Q14781 532 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms