RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 ADH1AP07327 375 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 ITIH3Q06033 890 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 RESTQ13127 1097 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 HSP90AA2PQ14568 343 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-204ENST00000562357 SYCE2Q6PIF2 218 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 GPBP1Q86WP2 473 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 GSTCDQ8NEC7 633 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 NECTIN4Q96NY8 510 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 ZSCAN16Q9H4T2 348 aaPredicted RBP19.57■□□□□ 0.72
CMTM3-204ENST00000562357 EPHX3Q9H6B9 360 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 DPP7Q9UHL4 492 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 ADAM28Q9UKQ2 775 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 ODF2LQ9ULJ1 636 aa19.57■□□□□ 0.72
CMTM3-204ENST00000562357 SF3B1O75533 1304 aaKnown RBP eCLIP19.56■□□□□ 0.72
CMTM3-204ENST00000562357 PI4K2BG5E9Z4 385 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 DCXO43602 365 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 STX6O43752 255 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 FAM13AO94988 1023 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 EDN1P05305 212 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 DHX8Q14562 1220 aaKnown RBP19.56■□□□□ 0.72
CMTM3-204ENST00000562357 TMEM31Q5JXX7 168 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 FUT10Q6P4F1 479 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 SUSD6Q92537 303 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 SNX21Q969T3 373 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 RPGRIP1Q96KN7 1286 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 RIPOR3Q96MK2 946 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 KLHL5Q96PQ7 755 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 ACO2Q99798 780 aaKnown RBP19.56■□□□□ 0.72
CMTM3-204ENST00000562357 NTPCRQ9BSD7 190 aaKnown RBP19.56■□□□□ 0.72
CMTM3-204ENST00000562357 S1PR5Q9H228 398 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 CCDC39Q9UFE4 941 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 CLIC4Q9Y696 253 aa19.56■□□□□ 0.72
CMTM3-204ENST00000562357 CASTOR2A6NHX0 329 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 TBCAO75347 108 aaKnown RBP19.55■□□□□ 0.72
CMTM3-204ENST00000562357 CNPP09543 421 aaKnown RBP19.55■□□□□ 0.72
CMTM3-204ENST00000562357 PLCG1P19174 1290 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 SCP2P22307 547 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 CREMQ03060 361 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 KARSQ15046 597 aaKnown RBP19.55■□□□□ 0.72
CMTM3-204ENST00000562357 USP41Q3LFD5 358 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 MPZL3Q6UWV2 235 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 BICD1Q96G01 975 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 TARS2Q9BW92 718 aaKnown RBP19.55■□□□□ 0.72
CMTM3-204ENST00000562357 CCSER1Q9C0I3 900 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 CDT1Q9H211 546 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 ADAM7Q9H2U9 754 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.55■□□□□ 0.72
CMTM3-204ENST00000562357 MTMR6Q9Y217 621 aa19.55■□□□□ 0.72
CMTM3-204ENST00000562357 PTGESO14684 152 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 MCF2P10911 925 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 PDIA4P13667 645 aaKnown RBP19.54■□□□□ 0.72
CMTM3-204ENST00000562357 EPCAMP16422 314 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 MARCKSP29966 332 aaPredicted RBP19.54■□□□□ 0.72
CMTM3-204ENST00000562357 GRM5P41594 1212 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 MTHFRP42898 656 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 DSG1Q02413 1049 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
CMTM3-204ENST00000562357 GRIN1Q05586 938 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 ELAVL2Q12926 359 aaKnown RBP19.54■□□□□ 0.72
CMTM3-204ENST00000562357 RARS2Q5T160 578 aaKnown RBP19.54■□□□□ 0.72
CMTM3-204ENST00000562357 ZBTB33Q86T24 672 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 SLC22A17Q8WUG5 538 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 LARP4BQ92615 738 aaKnown RBP19.54■□□□□ 0.72
CMTM3-204ENST00000562357 RAD54LQ92698 747 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 KHSRPQ92945 711 aaKnown RBP eCLIP19.54■□□□□ 0.72
CMTM3-204ENST00000562357 FBXL18Q96ME1 805 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 ZHX3Q9H4I2 956 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 SFXN1Q9H9B4 322 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 PARVGQ9HBI0 331 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 ANKFY1Q9P2R3 1169 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 NR2E1Q9Y466 385 aa19.54■□□□□ 0.72
CMTM3-204ENST00000562357 TDRD15B5MCY1 1934 aaKnown RBP19.53■□□□□ 0.72
CMTM3-204ENST00000562357 NPHP3-ACAD11A0A0J9YXS1 232 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 TOM1L1O75674 476 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 HARSP12081 509 aaKnown RBP19.53■□□□□ 0.72
CMTM3-204ENST00000562357 ABCD1P33897 745 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 MATR3P43243 847 aaKnown RBP eCLIP19.53■□□□□ 0.72
CMTM3-204ENST00000562357 OSTNP61366 133 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
CMTM3-204ENST00000562357 PTPAQ15257 358 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 ATAT1Q5SQI0 421 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 ZPBP2Q6X784 338 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 RNF135Q8IUD6 432 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 GPR65Q8IYL9 337 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 MYCT1Q8N699 235 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 TMEM161BQ8NDZ6 487 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 UROC1Q96N76 676 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 ACAP3Q96P50 834 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 REEP2Q9BRK0 252 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 SLC38A7Q9NVC3 462 aa19.53■□□□□ 0.72
CMTM3-204ENST00000562357 SRPRBQ9Y5M8 271 aaKnown RBP19.53■□□□□ 0.72
CMTM3-204ENST00000562357 LOC730098B7Z3J9 87 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 F8W810 466 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 CLDN3O15551 220 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 LILRB3O75022 631 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 GLUD1P00367 558 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 MAPTP10636 758 aaKnown RBP19.52■□□□□ 0.72
CMTM3-204ENST00000562357 CLCN4P51793 760 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 MCM6Q14566 821 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 NOLC1Q14978 699 aaKnown RBP eCLIP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms