RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 URODP06132 367 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 CNPP09543 421 aaKnown RBP17.04■□□□□ 0.32
CSHL1-208ENST00000558609 SYT1P21579 422 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 UBA7P41226 1012 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 ITIH3Q06033 890 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 TUSC3Q13454 348 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 KIAA0319Q5VV43 1072 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 TAS1R3Q7RTX0 852 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 RNF135Q8IUD6 432 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 SPIRE2Q8WWL2 714 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 ACO2Q99798 780 aaKnown RBP17.04■□□□□ 0.32
CSHL1-208ENST00000558609 APOL5Q9BWW9 433 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
CSHL1-208ENST00000558609 PTPRHQ9HD43 1115 aa17.04■□□□□ 0.32
CSHL1-208ENST00000558609 WDFY4Q6ZS81 3184 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 F8W810 466 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 K7ELQ4 463 aaPredicted RBP17.03■□□□□ 0.32
CSHL1-208ENST00000558609 THP07101 528 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 PLS3P13797 630 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 EPCAMP16422 314 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 KLRC2P26717 231 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 GLUD2P49448 558 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 CLCN4P51793 760 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 DSG1Q02413 1049 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 GRIN1Q05586 938 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 RESTQ13127 1097 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 NAB2Q15742 525 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 ARSHQ5FYA8 562 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 CES5AQ6NT32 575 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 GPR65Q8IYL9 337 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 RXFP1Q9HBX9 757 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 ADAM28Q9UKQ2 775 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 GDAQ9Y2T3 454 aa17.03■□□□□ 0.32
CSHL1-208ENST00000558609 SLC16A4O15374 487 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 MRE11P49959 708 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 SMTNP53814 917 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 RAD51AP2Q09MP3 1159 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 HSP90AA2PQ14568 343 aaPredicted RBP17.02■□□□□ 0.32
CSHL1-208ENST00000558609 PTPAQ15257 358 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 HERC4Q5GLZ8 1057 aaPredicted RBP17.02■□□□□ 0.32
CSHL1-208ENST00000558609 FUT10Q6P4F1 479 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 TMEM161BQ8NDZ6 487 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 NECTIN4Q96NY8 510 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 TARS2Q9BW92 718 aaKnown RBP17.02■□□□□ 0.32
CSHL1-208ENST00000558609 GPR62Q9BZJ7 368 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 CDT1Q9H211 546 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 CXCL16Q9H2A7 254 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 CLIC4Q9Y696 253 aa17.02■□□□□ 0.32
CSHL1-208ENST00000558609 C2CD2LO14523 706 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 TADA2AO75478 443 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 BRD1O95696 1058 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 PROZP22891 400 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 GRM5P41594 1212 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 MTHFRP42898 656 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 USP41Q3LFD5 358 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 KIAA1841Q6NSI8 718 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 LRRC15Q8TF66 581 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 RABGGTAQ92696 567 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 KCNN1Q92952 543 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 SNX21Q969T3 373 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 RPGRIP1Q96KN7 1286 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 FBXL18Q96ME1 805 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 PAAF1Q9BRP4 392 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 CCSER1Q9C0I3 900 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 BLOC1S4Q9NUP1 217 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
CSHL1-208ENST00000558609 ODF2LQ9ULJ1 636 aa17.01■□□□□ 0.31
CSHL1-208ENST00000558609 NPHP3-ACAD11A0A0J9YXS1 232 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 CASTOR2A6NHX0 329 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 ABLIM1O14639 778 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 TEX28O15482 410 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 C1RP00736 705 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 ADH1AP07327 375 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 MAPTP10636 758 aaKnown RBP17■□□□□ 0.31
CSHL1-208ENST00000558609 MCF2P10911 925 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 PLCG1P19174 1290 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 NHLH1Q02575 133 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 STRN3Q13033 797 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 KARSQ15046 597 aaKnown RBP17■□□□□ 0.31
CSHL1-208ENST00000558609 ZNF568Q3ZCX4 644 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 XKR4Q5GH76 650 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 RARS2Q5T160 578 aaKnown RBP17■□□□□ 0.31
CSHL1-208ENST00000558609 C12orf76Q8N812 135 aaPredicted RBP17■□□□□ 0.31
CSHL1-208ENST00000558609 RAD54LQ92698 747 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 RIPOR3Q96MK2 946 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 PPP1R10Q96QC0 940 aaKnown RBP17■□□□□ 0.31
CSHL1-208ENST00000558609 CCDC94Q9BW85 323 aaPredicted RBP17■□□□□ 0.31
CSHL1-208ENST00000558609 CACNG4Q9UBN1 327 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 MUTYHQ9UIF7 546 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 MTMR6Q9Y217 621 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 MYH11P35749 1972 aa17■□□□□ 0.31
CSHL1-208ENST00000558609 SF3B1O75533 1304 aaKnown RBP eCLIP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 H0YCG3 227 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 YARSP54577 528 aaKnown RBP16.99■□□□□ 0.31
CSHL1-208ENST00000558609 NCKAP1LP55160 1127 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 ATAT1Q5SQI0 421 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 KANK3Q6NY19 840 aa16.99■□□□□ 0.31
CSHL1-208ENST00000558609 MPZL3Q6UWV2 235 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms