RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ECI2O75521 394 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 ITGA4P13612 1032 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 HOXA11P31270 313 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-207ENST00000558500 MCM5P33992 734 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 JAK3P52333 1124 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 LIMK1P53667 647 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 NUCB1Q02818 461 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 FUT2Q10981 343 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 SIM2Q14190 667 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-207ENST00000558500 MTERF2Q49AM1 385 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 PRR16Q569H4 304 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 XKR3Q5GH77 459 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 PPM1LQ5SGD2 360 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 FUT10Q6P4F1 479 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 MICU3Q86XE3 530 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 KSR1Q8IVT5 923 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 NPAS3Q8IXF0 933 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 SMG8Q8ND04 991 aaKnown RBP7.57□□□□□ -1.2
LRRC28-207ENST00000558500 CNNM3Q8NE01 707 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 NLRP4Q96MN2 994 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 IER2Q9BTL4 223 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 COLEC11Q9BWP8 271 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 NIFKQ9BYG3 293 aaKnown RBP7.57□□□□□ -1.2
LRRC28-207ENST00000558500 IFT122Q9HBG6 1241 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 ZMIZ1Q9ULJ6 1067 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 V9GY48 417 aaPredicted RBP7.57□□□□□ -1.2
LRRC28-207ENST00000558500 FRYQ5TBA9 3013 aa7.57□□□□□ -1.2
LRRC28-207ENST00000558500 TMEM150BA6NC51 233 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 ARL5CA6NH57 179 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 C1QTNF9BB2RNN3 333 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 MAN2B1O00754 1011 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 CCL16O15467 120 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 HRO43593 1189 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 CHMP2AO43633 222 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 XYLBO75191 536 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 STBD1O95210 358 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 C8AP07357 584 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 POU2F2P09086 479 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 C1QTNF9P0C862 333 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 HOXA9P31269 272 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 SFNP31947 248 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 CIITAP33076 1130 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 CNR2P34972 360 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 MLH1P40692 756 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 SCNN1GP51170 649 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 CCR3P51677 355 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 PTGDRQ13258 359 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 AASDHQ4L235 1098 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-207ENST00000558500 LIN9Q5TKA1 542 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 SRGAP1Q7Z6B7 1085 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-207ENST00000558500 KDF1Q8NAX2 398 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-207ENST00000558500 RUFY2Q8WXA3 655 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 DNASE1L2Q92874 299 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 MAP4K1Q92918 833 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 COL26A1Q96A83 441 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 LENG9Q96B70 501 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 ZFP42Q96MM3 310 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 GAD1Q99259 594 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 RIT2Q99578 217 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 CLSTN3Q9BQT9 956 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 SH2D3AQ9BRG2 576 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 PLA2G2FQ9BZM2 168 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 MINDY3Q9H8M7 445 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 RBM28Q9NW13 759 aaKnown RBP7.56□□□□□ -1.2
LRRC28-207ENST00000558500 MIOSQ9NXC5 875 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 SEPT9Q9UHD8 586 aaPredicted RBP7.56□□□□□ -1.2
LRRC28-207ENST00000558500 ADAM28Q9UKQ2 775 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 KCNH3Q9ULD8 1083 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 NDRG2Q9UN36 371 aaKnown RBP7.56□□□□□ -1.2
LRRC28-207ENST00000558500 POLIQ9UNA4 740 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 IPPQ9Y573 584 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 DOCK8Q8NF50 2099 aa7.56□□□□□ -1.2
LRRC28-207ENST00000558500 SOBPA7XYQ1 873 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 CHURC1-FNTBB4DL54 471 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 ADAMTS3O15072 1205 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 MSH4O15457 936 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 SGSM2O43147 1006 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 KCNK5O95279 499 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 CHMLP26374 656 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 CXCL12P48061 93 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 FNTBP49356 437 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 FOSBP53539 338 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 SATB1Q01826 763 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 SRSF5Q13243 272 aaKnown RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 PABPC1LQ4VXU2 614 aaKnown RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 RTP2Q5QGT7 225 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 TANGO2Q6ICL3 276 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 PRSS55Q6UWB4 352 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 UNQ6494/PRO21346Q6UXR6 183 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 SGMS1Q86VZ5 419 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 LONP2Q86WA8 852 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 EXOC6Q8TAG9 804 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 ING5Q8WYH8 240 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 DDX12PQ92771 950 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 SLC5A5Q92911 643 aa7.55□□□□□ -1.2
LRRC28-207ENST00000558500 JPH2Q9BR39 696 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 EIF2AQ9BY44 585 aaKnown RBP7.55□□□□□ -1.2
LRRC28-207ENST00000558500 KRTAP3-3Q9BYR6 98 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms