RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 SMC6Q96SB8 1091 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 ACTR5Q9H9F9 607 aaPredicted RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 RBAKQ9NYW8 714 aaPredicted RBP16.51■□□□□ 0.23
AP4E1-202ENST00000558439 MYH6P13533 1939 aa16.51■□□□□ 0.23
AP4E1-202ENST00000558439 CYP3A7-CYP3A51PA0A087WV96 503 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 CYP3A7P24462 503 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 SFNP31947 248 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 CAP2P40123 477 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 IL9RQ01113 521 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 NBPF9Q3BBW0 867 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 BBOF1Q8ND07 529 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 LRRC8CQ8TDW0 803 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 ATG4CQ96DT6 458 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 LAMB4A4D0S4 1761 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 N4BP2Q86UW6 1770 aaPredicted RBP16.5■□□□□ 0.23
AP4E1-202ENST00000558439 BASP1P80723 227 aaKnown RBP16.5■□□□□ 0.23
AP4E1-202ENST00000558439 HADHQ16836 314 aaKnown RBP16.5■□□□□ 0.23
AP4E1-202ENST00000558439 PACS2Q86VP3 889 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 SLC13A5Q86YT5 568 aaPredicted RBP16.5■□□□□ 0.23
AP4E1-202ENST00000558439 HAUS2Q9NVX0 235 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 TMEM51Q9NW97 253 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 NUP188Q5SRE5 1749 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.5■□□□□ 0.23
AP4E1-202ENST00000558439 SPAG7O75391 227 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 RNF8O76064 485 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 FLT3P36888 993 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 CEP128Q6ZU80 1094 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 NUP98P52948 1817 aa16.5■□□□□ 0.23
AP4E1-202ENST00000558439 GTPBP10A4D1E9 387 aaKnown RBP16.49■□□□□ 0.23
AP4E1-202ENST00000558439 TCP11X1B4DZS4 312 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 MARCKSL1P49006 195 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 RARRES1P49788 294 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 YWHAGP61981 247 aaKnown RBP eCLIP16.49■□□□□ 0.23
AP4E1-202ENST00000558439 ZRSR2Q15696 482 aaKnown RBP16.49■□□□□ 0.23
AP4E1-202ENST00000558439 CASC4Q6P4E1 433 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 ARHGEF18Q6ZSZ5 1173 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 RFX6Q8HWS3 928 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 TATDN2Q93075 761 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 CDHR1Q96JP9 859 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 HSD17B14Q9BPX1 270 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 PABPC3Q9H361 631 aaKnown RBP16.49■□□□□ 0.23
AP4E1-202ENST00000558439 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 TBX20Q9UMR3 447 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 NWD2Q9ULI1 1742 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 SNED1Q8TER0 1413 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 NEBLO76041 1014 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 COILP38432 576 aaPredicted RBP16.49■□□□□ 0.23
AP4E1-202ENST00000558439 CLK2P49760 499 aaKnown RBP16.49■□□□□ 0.23
AP4E1-202ENST00000558439 H7C0C1 242 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 ATP5OP48047 213 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 HYIQ5T013 277 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 IZUMO3Q5VZ72 239 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 ERICH1Q86X53 443 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 MSL3Q8N5Y2 521 aaKnown RBP16.49■□□□□ 0.23
AP4E1-202ENST00000558439 MYH13Q9UKX3 1938 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
AP4E1-202ENST00000558439 PSMD10O75832 226 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 PYGMP11217 842 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 CYP11B1P15538 503 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 PRKCIP41743 596 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 NPTX2P47972 431 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 SYCP2LQ5T4T6 812 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 ZNF449Q6P9G9 518 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 TMC3Q7Z5M5 1100 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 ACSF2Q96CM8 615 aaPredicted RBP16.48■□□□□ 0.23
AP4E1-202ENST00000558439 PITPNM3Q9BZ71 974 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 MYO5AQ9Y4I1 1855 aaKnown RBP16.48■□□□□ 0.23
AP4E1-202ENST00000558439 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
AP4E1-202ENST00000558439 GPS1Q13098 491 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 AGBL2Q5U5Z8 902 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 SH3BP5LQ7L8J4 393 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 IQCKQ8N0W5 287 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 P3H4Q92791 437 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 JPH1Q9HDC5 661 aaPredicted RBP16.48■□□□□ 0.23
AP4E1-202ENST00000558439 KLC4Q9NSK0 619 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 ADAMTSL3P82987 1691 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 LCA5LO95447 670 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 HNRNPH1P31943 449 aaKnown RBP16.48■□□□□ 0.23
AP4E1-202ENST00000558439 SAMD7Q7Z3H4 446 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 PALB2Q86YC2 1186 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 SLC5A5Q92911 643 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 SLC9A2Q9UBY0 812 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 ICAM1P05362 532 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 CIITAP33076 1130 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 LMNB2Q03252 620 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 DGKZQ13574 1117 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 CDO1Q16878 200 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 SNF8Q96H20 258 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 TARS2Q9BW92 718 aaKnown RBP16.48■□□□□ 0.23
AP4E1-202ENST00000558439 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.48■□□□□ 0.23
AP4E1-202ENST00000558439 UVRAGQ9P2Y5 699 aa16.48■□□□□ 0.23
AP4E1-202ENST00000558439 A0A0A6YYK5 440 aaPredicted RBP16.47■□□□□ 0.23
AP4E1-202ENST00000558439 IGKV6D-41A0A0C4DH26 115 aa16.47■□□□□ 0.23
AP4E1-202ENST00000558439 HLA-DRAP01903 254 aa16.47■□□□□ 0.23
AP4E1-202ENST00000558439 ASTE1Q2TB18 679 aaPredicted RBP16.47■□□□□ 0.23
AP4E1-202ENST00000558439 SPOPLQ6IQ16 392 aa16.47■□□□□ 0.23
AP4E1-202ENST00000558439 RHOT1Q8IXI2 618 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms