RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 KCND2Q9NZV8 630 aa20.23■□□□□ 0.83
NEDD1-209ENST00000557092 CACNG4Q9UBN1 327 aa20.23■□□□□ 0.83
NEDD1-209ENST00000557092 SSX2IPQ9Y2D8 614 aa20.23■□□□□ 0.83
NEDD1-209ENST00000557092 CLIC4Q9Y696 253 aa20.23■□□□□ 0.83
NEDD1-209ENST00000557092 NPHP3-ACAD11A0A0J9YXS1 232 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 FAM86C2PA6NEL3 165 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 CASTOR2A6NHX0 329 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 PTGESO14684 152 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 DCXO43602 365 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 TADA2AO75478 443 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 CNPP09543 421 aaKnown RBP20.22■□□□□ 0.83
NEDD1-209ENST00000557092 PLS3P13797 630 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 SMTNP53814 917 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 KARSQ15046 597 aaKnown RBP20.22■□□□□ 0.83
NEDD1-209ENST00000557092 RARS2Q5T160 578 aaKnown RBP20.22■□□□□ 0.83
NEDD1-209ENST00000557092 FUT10Q6P4F1 479 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 TAS1R3Q7RTX0 852 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 GPBP1Q86WP2 473 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 SLC22A17Q8WUG5 538 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 SPIRE2Q8WWL2 714 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 TARS2Q9BW92 718 aaKnown RBP20.22■□□□□ 0.83
NEDD1-209ENST00000557092 DAXXQ9UER7 740 aaPredicted RBP20.22■□□□□ 0.83
NEDD1-209ENST00000557092 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 ADAM28Q9UKQ2 775 aa20.22■□□□□ 0.83
NEDD1-209ENST00000557092 MYH11P35749 1972 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 C5orf42Q9H799 3197 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 LILRB3O75022 631 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 PLCG1P19174 1290 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 MARCKSP29966 332 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-209ENST00000557092 CEBPZQ03701 1054 aaKnown RBP20.21■□□□□ 0.83
NEDD1-209ENST00000557092 ITIH3Q06033 890 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 STRN3Q13033 797 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 HSP90AA2PQ14568 343 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-209ENST00000557092 FAM173BQ6P4H8 233 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 ZBTB33Q86T24 672 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 RNF135Q8IUD6 432 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 RNF168Q8IYW5 571 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-209ENST00000557092 C12orf76Q8N812 135 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-209ENST00000557092 TCHPQ9BT92 498 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 CCDC94Q9BW85 323 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-209ENST00000557092 CDT1Q9H211 546 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 CXCL16Q9H2A7 254 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 ADAM7Q9H2U9 754 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 MUTYHQ9UIF7 546 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
NEDD1-209ENST00000557092 LOC730098B7Z3J9 87 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 KRT18P05783 430 aaKnown RBP20.2■□□□□ 0.82
NEDD1-209ENST00000557092 ADH1AP07327 375 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 HARSP12081 509 aaKnown RBP20.2■□□□□ 0.82
NEDD1-209ENST00000557092 COL9A1P20849 921 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 CLCN4P51793 760 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 YARSP54577 528 aaKnown RBP20.2■□□□□ 0.82
NEDD1-209ENST00000557092 OSTNP61366 133 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 GLRA4Q5JXX5 417 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 CEP120Q8N960 986 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 LRRC15Q8TF66 581 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 HASPINQ8TF76 798 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 B3GALT6Q96L58 329 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 FBXL18Q96ME1 805 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 PAAF1Q9BRP4 392 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 GPR62Q9BZJ7 368 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
NEDD1-209ENST00000557092 MTMR6Q9Y217 621 aa20.2■□□□□ 0.82
NEDD1-209ENST00000557092 STX6O43752 255 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 FAM13AO94988 1023 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 EFEMP2O95967 443 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 WEE2P0C1S8 567 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 SP100P23497 879 aaPredicted RBP20.19■□□□□ 0.82
NEDD1-209ENST00000557092 GRM5P41594 1212 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 DSG1Q02413 1049 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 MCM6Q14566 821 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 PTPAQ15257 358 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 USP41Q3LFD5 358 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 ARSHQ5FYA8 562 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 KIAA0319Q5VV43 1072 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 MPZL3Q6UWV2 235 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 HSCBQ8IWL3 235 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 TMEM161BQ8NDZ6 487 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 RAD54LQ92698 747 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 RIPOR3Q96MK2 946 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 NECTIN4Q96NY8 510 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 REEP2Q9BRK0 252 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 NTPCRQ9BSD7 190 aaKnown RBP20.19■□□□□ 0.82
NEDD1-209ENST00000557092 LRFN3Q9BTN0 628 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 PTPRHQ9HD43 1115 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 TOPORSQ9NS56 1045 aaPredicted RBP20.19■□□□□ 0.82
NEDD1-209ENST00000557092 BLOC1S4Q9NUP1 217 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 ODF2LQ9ULJ1 636 aa20.19■□□□□ 0.82
NEDD1-209ENST00000557092 SF3B1O75533 1304 aaKnown RBP eCLIP20.19■□□□□ 0.82
NEDD1-209ENST00000557092 H0YCG3 227 aa20.18■□□□□ 0.82
NEDD1-209ENST00000557092 TEX28O15482 410 aa20.18■□□□□ 0.82
NEDD1-209ENST00000557092 GPR37L1O60883 481 aa20.18■□□□□ 0.82
NEDD1-209ENST00000557092 KIF4AO95239 1232 aa20.18■□□□□ 0.82
NEDD1-209ENST00000557092 MAPTP10636 758 aaKnown RBP20.18■□□□□ 0.82
NEDD1-209ENST00000557092 MCF2P10911 925 aa20.18■□□□□ 0.82
NEDD1-209ENST00000557092 MTHFRP42898 656 aa20.18■□□□□ 0.82
NEDD1-209ENST00000557092 KANK3Q6NY19 840 aa20.18■□□□□ 0.82
NEDD1-209ENST00000557092 RIN2Q8WYP3 895 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms