RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 KCND2Q9NZV8 630 aa20.23■□□□□ 0.83
NEDD1-208ENST00000555806 CACNG4Q9UBN1 327 aa20.23■□□□□ 0.83
NEDD1-208ENST00000555806 SSX2IPQ9Y2D8 614 aa20.23■□□□□ 0.83
NEDD1-208ENST00000555806 CLIC4Q9Y696 253 aa20.23■□□□□ 0.83
NEDD1-208ENST00000555806 NPHP3-ACAD11A0A0J9YXS1 232 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 FAM86C2PA6NEL3 165 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 CASTOR2A6NHX0 329 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 PTGESO14684 152 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 DCXO43602 365 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 TADA2AO75478 443 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 CNPP09543 421 aaKnown RBP20.22■□□□□ 0.83
NEDD1-208ENST00000555806 PLS3P13797 630 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 SMTNP53814 917 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 KARSQ15046 597 aaKnown RBP20.22■□□□□ 0.83
NEDD1-208ENST00000555806 RARS2Q5T160 578 aaKnown RBP20.22■□□□□ 0.83
NEDD1-208ENST00000555806 FUT10Q6P4F1 479 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 TAS1R3Q7RTX0 852 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 GPBP1Q86WP2 473 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 SLC22A17Q8WUG5 538 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 SPIRE2Q8WWL2 714 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 TARS2Q9BW92 718 aaKnown RBP20.22■□□□□ 0.83
NEDD1-208ENST00000555806 DAXXQ9UER7 740 aaPredicted RBP20.22■□□□□ 0.83
NEDD1-208ENST00000555806 KCNG1Q9UIX4 513 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 ADAM28Q9UKQ2 775 aa20.22■□□□□ 0.83
NEDD1-208ENST00000555806 MYH11P35749 1972 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 C5orf42Q9H799 3197 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 LILRB3O75022 631 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 PLCG1P19174 1290 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 MARCKSP29966 332 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-208ENST00000555806 CEBPZQ03701 1054 aaKnown RBP20.21■□□□□ 0.83
NEDD1-208ENST00000555806 ITIH3Q06033 890 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 STRN3Q13033 797 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 HSP90AA2PQ14568 343 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-208ENST00000555806 FAM173BQ6P4H8 233 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 ZBTB33Q86T24 672 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 RNF135Q8IUD6 432 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 RNF168Q8IYW5 571 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-208ENST00000555806 C12orf76Q8N812 135 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-208ENST00000555806 TCHPQ9BT92 498 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 CCDC94Q9BW85 323 aaPredicted RBP20.21■□□□□ 0.83
NEDD1-208ENST00000555806 CDT1Q9H211 546 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 CXCL16Q9H2A7 254 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 ADAM7Q9H2U9 754 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 MUTYHQ9UIF7 546 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 CDH22Q9UJ99 828 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 GTF3C3Q9Y5Q9 886 aa20.21■□□□□ 0.83
NEDD1-208ENST00000555806 LOC730098B7Z3J9 87 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 KRT18P05783 430 aaKnown RBP20.2■□□□□ 0.82
NEDD1-208ENST00000555806 ADH1AP07327 375 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 HARSP12081 509 aaKnown RBP20.2■□□□□ 0.82
NEDD1-208ENST00000555806 COL9A1P20849 921 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 CLCN4P51793 760 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 YARSP54577 528 aaKnown RBP20.2■□□□□ 0.82
NEDD1-208ENST00000555806 OSTNP61366 133 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 GLRA4Q5JXX5 417 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 CEP120Q8N960 986 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 LRRC15Q8TF66 581 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 HASPINQ8TF76 798 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 B3GALT6Q96L58 329 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 FBXL18Q96ME1 805 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 PAAF1Q9BRP4 392 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 GPR62Q9BZJ7 368 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
NEDD1-208ENST00000555806 MTMR6Q9Y217 621 aa20.2■□□□□ 0.82
NEDD1-208ENST00000555806 STX6O43752 255 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 FAM13AO94988 1023 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 EFEMP2O95967 443 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 WEE2P0C1S8 567 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 SP100P23497 879 aaPredicted RBP20.19■□□□□ 0.82
NEDD1-208ENST00000555806 GRM5P41594 1212 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 DSG1Q02413 1049 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 MCM6Q14566 821 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 PTPAQ15257 358 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 USP41Q3LFD5 358 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 ARSHQ5FYA8 562 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 SPECC1Q5M775 1068 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 KIAA0319Q5VV43 1072 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 MPZL3Q6UWV2 235 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 HSCBQ8IWL3 235 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 TMEM161BQ8NDZ6 487 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 RAD54LQ92698 747 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 RIPOR3Q96MK2 946 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 NECTIN4Q96NY8 510 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 REEP2Q9BRK0 252 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 NTPCRQ9BSD7 190 aaKnown RBP20.19■□□□□ 0.82
NEDD1-208ENST00000555806 LRFN3Q9BTN0 628 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 PTPRHQ9HD43 1115 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 TOPORSQ9NS56 1045 aaPredicted RBP20.19■□□□□ 0.82
NEDD1-208ENST00000555806 BLOC1S4Q9NUP1 217 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 ODF2LQ9ULJ1 636 aa20.19■□□□□ 0.82
NEDD1-208ENST00000555806 SF3B1O75533 1304 aaKnown RBP eCLIP20.19■□□□□ 0.82
NEDD1-208ENST00000555806 H0YCG3 227 aa20.18■□□□□ 0.82
NEDD1-208ENST00000555806 TEX28O15482 410 aa20.18■□□□□ 0.82
NEDD1-208ENST00000555806 GPR37L1O60883 481 aa20.18■□□□□ 0.82
NEDD1-208ENST00000555806 KIF4AO95239 1232 aa20.18■□□□□ 0.82
NEDD1-208ENST00000555806 MAPTP10636 758 aaKnown RBP20.18■□□□□ 0.82
NEDD1-208ENST00000555806 MCF2P10911 925 aa20.18■□□□□ 0.82
NEDD1-208ENST00000555806 MTHFRP42898 656 aa20.18■□□□□ 0.82
NEDD1-208ENST00000555806 KANK3Q6NY19 840 aa20.18■□□□□ 0.82
NEDD1-208ENST00000555806 RIN2Q8WYP3 895 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms