RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 CDYL2Q8N8U2 506 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 FANCBQ8NB91 859 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 CYP2W1Q8TAV3 490 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 SPPL3Q8TCT6 385 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 GATA6Q92908 595 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 NMD3Q96D46 503 aaKnown RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 IQCDQ96DY2 449 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 CLPTM1LQ96KA5 538 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 SAMD11Q96NU1 681 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 BARD1Q99728 777 aaKnown RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 TREX2Q9BQ50 279 aaPredicted RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 PRKRIP1Q9H875 184 aaPredicted RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 SARS2Q9NP81 518 aaKnown RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 GJB4Q9NTQ9 266 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 PIH1D1Q9NWS0 290 aaKnown RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 IRAK4Q9NWZ3 460 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 COL20A1Q9P218 1284 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 AFF4Q9UHB7 1163 aaKnown RBP6.96□□□□□ -1.3
FCF1-207ENST00000554973 CPA4Q9UI42 421 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 PCDHB6Q9Y5E3 794 aa6.96□□□□□ -1.3
FCF1-207ENST00000554973 FADS2P1A8MWK0 482 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 PLOD3O60568 738 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 SOAT2O75908 522 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 H2AFB1P0C5Y9 115 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 H2AFB2P0C5Z0 115 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 AOAHP28039 575 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 TUBP50607 506 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 CDC42EP1Q00587 391 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 NOMO1Q15155 1222 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 KHDC1Q4VXA5 237 aaKnown RBP6.95□□□□□ -1.3
FCF1-207ENST00000554973 PRSS36Q5K4E3 855 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 GJC2Q5T442 439 aaPredicted RBP6.95□□□□□ -1.3
FCF1-207ENST00000554973 CCDC30Q5VVM6 783 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 CATSPERGQ6ZRH7 1159 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 SIAH1Q8IUQ4 282 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 RHOT1Q8IXI2 618 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 SH2D3CQ8N5H7 860 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.95□□□□□ -1.3
FCF1-207ENST00000554973 UTP4Q969X6 686 aaKnown RBP6.95□□□□□ -1.3
FCF1-207ENST00000554973 MAELQ96JY0 434 aaKnown RBP6.95□□□□□ -1.3
FCF1-207ENST00000554973 HSPA12BQ96MM6 686 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 JMJD8Q96S16 334 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 PYM1Q9BRP8 204 aaKnown RBP6.95□□□□□ -1.3
FCF1-207ENST00000554973 CHCHD6Q9BRQ6 235 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 NKIRAS2Q9NYR9 191 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 BTBD7Q9P203 1132 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 ABCF2Q9UG63 623 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 MAN2B2Q9Y2E5 1009 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 RPGRIP1LQ68CZ1 1315 aa6.95□□□□□ -1.3
FCF1-207ENST00000554973 A0A087X0M5 115 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 A0A1B0GX30 115 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 H3BS24 57 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 THAP12O43422 761 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 NRP2O60462 931 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 TBX18O95935 607 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 NTRK1P04629 796 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 ATP1A3P13637 1013 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 XPAP23025 273 aaPredicted RBP6.94□□□□□ -1.3
FCF1-207ENST00000554973 HOXD12P35452 270 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 LIFRP42702 1097 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 RGS3P49796 1198 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 FOXO4P98177 505 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 EGR3Q06889 387 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 NOLC1Q14978 699 aaKnown RBP eCLIP6.94□□□□□ -1.3
FCF1-207ENST00000554973 AOC3Q16853 763 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 GAREM2Q75VX8 874 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 HEATR4Q86WZ0 1026 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 CREG2Q8IUH2 290 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 DZIP1LQ8IYY4 767 aaKnown RBP6.94□□□□□ -1.3
FCF1-207ENST00000554973 ARMC10Q8N2F6 343 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 TSPYL6Q8N831 410 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 NKAIN3Q8N8D7 197 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 LSMEM1Q8N8F7 131 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 GPR156Q8NFN8 814 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 TTLL11Q8NHH1 800 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 FAM71BQ8TC56 605 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 STT3BQ8TCJ2 826 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 HERVK_113Q902F9 699 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 TP53INP1Q96A56 240 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 ASIC4Q96FT7 647 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 MRGPRX4Q96LA9 322 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 MRGPRX1Q96LB2 322 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 PITHD1Q9GZP4 211 aaPredicted RBP6.94□□□□□ -1.3
FCF1-207ENST00000554973 SENP6Q9GZR1 1112 aaPredicted RBP6.94□□□□□ -1.3
FCF1-207ENST00000554973 LMAN2LQ9H0V9 348 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 KCNF1Q9H3M0 494 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 MTG2Q9H4K7 406 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 MKNK2Q9HBH9 465 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 OLA1Q9NTK5 396 aaKnown RBP6.94□□□□□ -1.3
FCF1-207ENST00000554973 TDP1Q9NUW8 608 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 STK32BQ9NY57 414 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 CALCOCO1Q9P1Z2 691 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 KIF17Q9P2E2 1029 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 FBXO10Q9UK96 956 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 PCDHB4Q9Y5E5 795 aa6.94□□□□□ -1.3
FCF1-207ENST00000554973 A0A0A6YYJ9 748 aa6.93□□□□□ -1.3
FCF1-207ENST00000554973 TRIM38O00635 465 aa6.93□□□□□ -1.3
FCF1-207ENST00000554973 NFIBO00712 420 aa6.93□□□□□ -1.3
FCF1-207ENST00000554973 OPHN1O60890 802 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms