RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 SH3RF2Q8TEC5 729 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 ZNF396Q96N95 335 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 AARSD1Q9BTE6 412 aaKnown RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 POLR3CQ9BUI4 534 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 UPF2Q9HAU5 1272 aaKnown RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 OGFRQ9NZT2 677 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 RSPH14Q9UHP6 348 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 TCRBV5S4A2TA0A5A2 114 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 ESYT3A0FGR9 886 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 HMMRO75330 724 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 PEX14O75381 377 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 HSP90AB1P08238 724 aaKnown RBP5.1□□□□□ -1.59
ATXN3-227ENST00000554491 FGFR1P11362 822 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 SKILP12757 684 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 GPR85P60893 370 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 FOXE3Q13461 319 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 RASA3Q14644 834 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 NOLC1Q14978 699 aaKnown RBP eCLIP5.1□□□□□ -1.59
ATXN3-227ENST00000554491 RNF151Q2KHN1 245 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 NRN1LQ496H8 165 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 DNAJC21Q5F1R6 531 aaKnown RBP5.1□□□□□ -1.59
ATXN3-227ENST00000554491 AGBL4Q5VU57 503 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 STYK1Q6J9G0 422 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 NSMFQ6X4W1 530 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 REXO1L1PQ8IX06 675 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 LZTS2Q9BRK4 669 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 C22orf23Q9BZE7 217 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 IPPKQ9H8X2 491 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 CASP8AP2Q9UKL3 1982 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 ADAMTS7Q9UKP4 1686 aa5.1□□□□□ -1.59
ATXN3-227ENST00000554491 SCN4AP35499 1836 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 ADAMTSL1Q8N6G6 1762 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 COL5A3P25940 1745 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 PALLDQ8WX93 1383 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 BICDL2A1A5D9 508 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 KIF5CO60282 957 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 FRAT2O75474 233 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 VEGFAP15692 232 aaPredicted RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 MSNP26038 577 aaKnown RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 GTF2F1P35269 517 aaKnown RBP eCLIP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 EIF5P55010 431 aaKnown RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 RAC3P60763 192 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 TGFB2P61812 414 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 IFT88Q13099 833 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 BECN1Q14457 450 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 MAP9Q49MG5 647 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 USP39Q53GS9 565 aaKnown RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 MIIPQ5JXC2 388 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 Q6ZSN1 163 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 ANKS3Q6ZW76 656 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 IFNL3Q8IZI9 196 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 KCNH5Q8NCM2 988 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 EXTL1Q92935 676 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 TNPO1Q92973 898 aaKnown RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 ZNF503Q96F45 646 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 DPYSL5Q9BPU6 564 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 ZFYVE21Q9BQ24 234 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 SENP7Q9BQF6 1050 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 TINF2Q9BSI4 451 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 MMTAG2Q9BU76 263 aaKnown RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 CDK19Q9BWU1 502 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 CARD11Q9BXL7 1154 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 IQCGQ9H095 443 aaKnown RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 ETAA1Q9NY74 926 aa5.09□□□□□ -1.59
ATXN3-227ENST00000554491 R3HCC1Q9Y3T6 440 aaKnown RBP5.09□□□□□ -1.59
ATXN3-227ENST00000554491 MEGF6O75095 1541 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 A0A0G2JLW4 131 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 FAM90A27PA6NNH2 459 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 TMCO5BA8MYB1 307 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 FAM47E-STBD1D6RA91 191 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 MAP4K4O95819 1239 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 MMP10P09238 476 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 DPEP1P16444 411 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 COMTP21964 271 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 BDNFP23560 247 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 RBM5P52756 815 aaKnown RBP eCLIP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 RRADP55042 308 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 DGCR2P98153 550 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 POU5F1Q01860 360 aaKnown RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 ARID5AQ03989 594 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 ADCY2Q08462 1091 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 CCDC173Q0VFZ6 552 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 DBPQ10586 325 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 CHAF1AQ13111 956 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 TOP3AQ13472 1001 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 GNL2Q13823 731 aaKnown RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 FHL2Q14192 279 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 BMS1Q14692 1282 aaKnown RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 FILIP1LQ4L180 1135 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 C16orf87Q6PH81 154 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 CCDC73Q6ZRK6 1079 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 SMIM5Q71RC9 77 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 OTUD6AQ7L8S5 288 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 CATIPQ7Z7H3 387 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 FMNL3Q8IVF7 1028 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 IQCF2Q8IXL9 164 aa5.08□□□□□ -1.6
ATXN3-227ENST00000554491 PNISRQ8TF01 805 aaKnown RBP5.08□□□□□ -1.6
ATXN3-227ENST00000554491 EDAQ92838 391 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms