RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 KLK14Q9P0G3 267 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 CD207Q9UJ71 328 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 PRG3Q9Y2Y8 225 aaPredicted RBP14.34□□□□□ -0.11
SHMT2-211ENST00000554310 CITO14578 2027 aa14.34□□□□□ -0.11
SHMT2-211ENST00000554310 MUC3AQ02505 3323 aa14.33□□□□□ -0.11
SHMT2-211ENST00000554310 NPHP3-ACAD11A0A0J9YXS1 232 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-211ENST00000554310 PER2O15055 1255 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 FAM13AO94988 1023 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 YEATS4O95619 227 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 BRD1O95696 1058 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 MCF2P10911 925 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 IL9P15248 144 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 PROZP22891 400 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 ABCD1P33897 745 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 OR1G1P47890 313 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 COASYQ13057 564 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 TUSC3Q13454 348 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
SHMT2-211ENST00000554310 SPECC1Q5M775 1068 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 MPZL3Q6UWV2 235 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 ZPBP2Q6X784 338 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 TMEM184AQ6ZMB5 413 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 CCDC73Q6ZRK6 1079 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 LINC00301Q8NCQ3 95 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 SMRP1Q8NCR6 262 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 MSLNLQ96KJ4 702 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 CLIC6Q96NY7 704 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 NECAB3Q96P71 396 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-211ENST00000554310 HERC2P3Q9BVR0 1158 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 TARS2Q9BW92 718 aaKnown RBP14.33□□□□□ -0.12
SHMT2-211ENST00000554310 CDT1Q9H211 546 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 PTPRHQ9HD43 1115 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 TOPORSQ9NS56 1045 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-211ENST00000554310 MIOSQ9NXC5 875 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 CLEC1BQ9P126 229 aa14.33□□□□□ -0.12
SHMT2-211ENST00000554310 BARX2Q9UMQ3 279 aaPredicted RBP14.33□□□□□ -0.12
SHMT2-211ENST00000554310 PTGESO14684 152 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 SPTLC2O15270 562 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 PPP6R2O75170 966 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 TOM1L1O75674 476 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 SOD2P04179 222 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 CA8P35219 290 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 GRM5P41594 1212 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 KCNC3Q14003 757 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 PTPN14Q15678 1187 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 CLUL1Q15846 466 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 RRAGBQ5VZM2 374 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 VN1R2Q8NFZ6 395 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 CCDC94Q9BW85 323 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-211ENST00000554310 COLEC11Q9BWP8 271 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 PRKAG3Q9UGI9 489 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 GDAQ9Y2T3 454 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 TRIP11Q15643 1979 aa14.32□□□□□ -0.12
SHMT2-211ENST00000554310 PDCD11Q14690 1871 aaKnown RBP14.31□□□□□ -0.12
SHMT2-211ENST00000554310 K7ENM7 598 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 ABLIM1O14639 778 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 MBTPS2O43462 519 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 CLASP2O75122 1294 aaKnown RBP14.31□□□□□ -0.12
SHMT2-211ENST00000554310 CXCL14O95715 111 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 EFEMP2O95967 443 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 URODP06132 367 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 THP07101 528 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 STAT6P42226 847 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 YARSP54577 528 aaKnown RBP14.31□□□□□ -0.12
SHMT2-211ENST00000554310 NOLC1Q14978 699 aaKnown RBP eCLIP14.31□□□□□ -0.12
SHMT2-211ENST00000554310 SMAD2Q15796 467 aaKnown RBP14.31□□□□□ -0.12
SHMT2-211ENST00000554310 ATL3Q6DD88 541 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 HAUS6Q7Z4H7 955 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 FAM178BQ8IXR5 827 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 RNF168Q8IYW5 571 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-211ENST00000554310 MYCT1Q8N699 235 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 TMEM87AQ8NBN3 555 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 CASP10Q92851 521 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 TCHPQ9BT92 498 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 ANKFY1Q9P2R3 1169 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 SSX2IPQ9Y2D8 614 aa14.31□□□□□ -0.12
SHMT2-211ENST00000554310 TRAK2O60296 914 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 GLUD2P49448 558 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 RBM10P98175 930 aaKnown RBP14.3□□□□□ -0.12
SHMT2-211ENST00000554310 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-211ENST00000554310 NAB2Q15742 525 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 FOXD4L5Q5VV16 416 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-211ENST00000554310 FUT10Q6P4F1 479 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 PPFIBP1Q86W92 1011 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 CEP120Q8N960 986 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 FOXD4L4Q8WXT5 416 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-211ENST00000554310 AUTS2Q8WXX7 1259 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 BICD1Q96G01 975 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 SNX27Q96L92 541 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 POP1Q99575 1024 aaKnown RBP14.3□□□□□ -0.12
SHMT2-211ENST00000554310 EMILIN2Q9BXX0 1053 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 MRPL17Q9NRX2 175 aaKnown RBP14.3□□□□□ -0.12
SHMT2-211ENST00000554310 ADAM28Q9UKQ2 775 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 HCFC2Q9Y5Z7 792 aa14.3□□□□□ -0.12
SHMT2-211ENST00000554310 SF3B1O75533 1304 aaKnown RBP eCLIP14.3□□□□□ -0.125e-8■■■■■ 37.4
SHMT2-211ENST00000554310 HNRNPDLO14979 420 aaKnown RBP14.29□□□□□ -0.12
SHMT2-211ENST00000554310 CLDN3O15551 220 aa14.29□□□□□ -0.12
SHMT2-211ENST00000554310 PIGRP01833 764 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms