RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 CACNG4Q9UBN1 327 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 GMEB2Q9UKD1 530 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 ADAM28Q9UKQ2 775 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 HES2Q9Y543 173 aa10.16□□□□□ -0.78
PRKCH-208ENST00000553846 CYP3A7-CYP3A51PA0A087WV96 503 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-208ENST00000553846 C8AP07357 584 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 CYP3A7P24462 503 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 DNM2P50570 870 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 LIMK1P53667 647 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 NPEPPSP55786 919 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 CREMQ03060 361 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 ADCY1Q08828 1119 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 LAMTOR4Q0VGL1 99 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 NAB2Q15742 525 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 Q4G0T1 1027 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 WDR44Q5JSH3 913 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 IFNLR1Q8IU57 520 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-208ENST00000553846 GLYCTKQ8IVS8 523 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 CELF5Q8N6W0 485 aaKnown RBP10.15□□□□□ -0.78
PRKCH-208ENST00000553846 CNNM3Q8NE01 707 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 LNX1Q8TBB1 728 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-208ENST00000553846 PRPF31Q8WWY3 499 aaKnown RBP10.15□□□□□ -0.78
PRKCH-208ENST00000553846 DNASE1L2Q92874 299 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 CCDC51Q96ER9 411 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 FAM193BQ96PV7 902 aaPredicted RBP10.15□□□□□ -0.78
PRKCH-208ENST00000553846 NELL2Q99435 816 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 PHF20Q9BVI0 1012 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 TEKT3Q9BXF9 490 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 NXF3Q9H4D5 531 aaKnown RBP10.15□□□□□ -0.78
PRKCH-208ENST00000553846 HEBP1Q9NRV9 189 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 HCFC1R1Q9NWW0 138 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 TCEAL9Q9UHQ7 104 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 ANGPTL2Q9UKU9 493 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 KCNH3Q9ULD8 1083 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 SPAG17Q6Q759 2223 aa10.15□□□□□ -0.78
PRKCH-208ENST00000553846 NCANO14594 1321 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 GOLGA8AA7E2F4 631 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 GOLGA8BA8MQT2 603 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 M0R2N6 131 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 EML1O00423 815 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 CCL16O15467 120 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 PAPSS2O95340 614 aaPredicted RBP10.14□□□□□ -0.79
PRKCH-208ENST00000553846 ITGA4P13612 1032 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
PRKCH-208ENST00000553846 USP11P51784 963 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 DMWDQ09019 674 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 LPAL2Q16609 132 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 N4BP2L1Q5TBK1 243 aaPredicted RBP10.14□□□□□ -0.79
PRKCH-208ENST00000553846 ZNF852Q6ZMS4 543 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 MIER3Q7Z3K6 550 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 RABGGTAQ92696 567 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 CCDC136Q96JN2 1154 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 TCEANC2Q96MN5 208 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 IER2Q9BTL4 223 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 COLEC11Q9BWP8 271 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 TMEM121BQ9BXQ6 578 aaPredicted RBP10.14□□□□□ -0.79
PRKCH-208ENST00000553846 C6orf50Q9HD87 102 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 AVENQ9NQS1 362 aaPredicted RBP10.14□□□□□ -0.79
PRKCH-208ENST00000553846 DNMT3BQ9UBC3 853 aaKnown RBP10.14□□□□□ -0.79
PRKCH-208ENST00000553846 VAV3Q9UKW4 847 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 WASF3Q9UPY6 502 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 GIT1Q9Y2X7 761 aa10.14□□□□□ -0.79
PRKCH-208ENST00000553846 CELSR3Q9NYQ7 3312 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 SF3B1O75533 1304 aaKnown RBP eCLIP10.13□□□□□ -0.796e-10■■■■■ 187.2
PRKCH-208ENST00000553846 SDK1Q7Z5N4 2213 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 K7ESF4 209 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 ARNTLO00327 626 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 HRO43593 1189 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 KIF4AO95239 1232 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 TDP2O95551 362 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 PTENP60484 403 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 SATB1Q01826 763 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 MBTD1Q05BQ5 628 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 GRIK3Q13003 919 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 NPY5RQ15761 445 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 NTRK3Q16288 839 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 PRSS36Q5K4E3 855 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 TANGO2Q6ICL3 276 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 FERMT3Q86UX7 667 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 SLC7A14Q8TBB6 771 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 PSPC1Q8WXF1 523 aaKnown RBP10.13□□□□□ -0.79
PRKCH-208ENST00000553846 TMEM143Q96AN5 459 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 JPH2Q9BR39 696 aaPredicted RBP10.13□□□□□ -0.79
PRKCH-208ENST00000553846 CSRNP2Q9H175 543 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 TRPV5Q9NQA5 729 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 XPNPEP1Q9NQW7 623 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 GDE1Q9NZC3 331 aa10.13□□□□□ -0.79
PRKCH-208ENST00000553846 ASH1LQ9NR48 2969 aaKnown RBP10.12□□□□□ -0.79
PRKCH-208ENST00000553846 KLF18A0A0U1RQI7 1052 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 DDX11L8A8MPP1 907 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 PTGESO14684 152 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 NCAM2O15394 837 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 PRPF3O43395 683 aaKnown RBP10.12□□□□□ -0.79
PRKCH-208ENST00000553846 PROS1P07225 676 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 SRGAP2CP0DJJ0 459 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 CHRNB1P11230 501 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 CEBPBP17676 345 aa10.12□□□□□ -0.79
PRKCH-208ENST00000553846 ARF4P18085 180 aaPredicted RBP10.12□□□□□ -0.79
PRKCH-208ENST00000553846 IGFBP6P24592 240 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms