RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 UBE3AQ05086 875 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 FAM160A1Q05DH4 1040 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 DSC1Q08554 894 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 KYAT1Q16773 422 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 PTPROQ16827 1216 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 ZC2HC1CQ53FD0 456 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 FAM26FQ5R3K3 315 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 KCNT2Q6UVM3 1135 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 STXBP4Q6ZWJ1 553 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 THNSL1Q8IYQ7 743 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 GRAMD1CQ8IYS0 662 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 KLHL23Q8NBE8 558 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 PAGE5Q96GU1 130 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 CCDC34Q96HJ3 373 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 ZFP42Q96MM3 310 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 IPO9Q96P70 1041 aaKnown RBP12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 CCDC94Q9BW85 323 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 TOPORSQ9NS56 1045 aaPredicted RBP12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 SNTG2Q9NY99 539 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 TBC1D7Q9P0N9 293 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 EXOC7Q9UPT5 735 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 PCDHB13Q9Y5F0 798 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 MTCH2Q9Y6C9 303 aa12.82□□□□□ -0.36
TRAFD1-209ENST00000552896 TSC2P49815 1807 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 EIF3DO15371 548 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 B4GALT3O60512 393 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 ZNF202O95125 648 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 ITGB1P05556 798 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 MYBP10242 640 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 IGFBP4P22692 258 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 CASP1P29466 404 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 ALDH7A1P49419 539 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 AFF1P51825 1210 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 YARSP54577 528 aaKnown RBP12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 BCAR1P56945 870 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 CUL4BQ13620 913 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 TIGD5Q53EQ6 642 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 SLC39A4Q6P5W5 647 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 KRBA2Q6ZNG9 492 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 FMR1NBQ8N0W7 255 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 SLC39A11Q8N1S5 342 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 CEP120Q8N960 986 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 GSTCDQ8NEC7 633 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 MAFAQ8NHW3 353 aaPredicted RBP12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 SNX27Q96L92 541 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 ACCSQ96QU6 501 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 TMEM175Q9BSA9 504 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 TCHPQ9BT92 498 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 FGFBP2Q9BYJ0 223 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 BLZF1Q9H2G9 400 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 NRDE2Q9H7Z3 1164 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 PLAGL2Q9UPG8 496 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 LZTS1Q9Y250 596 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
TRAFD1-209ENST00000552896 A0A0B4J269 797 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 PTGESO14684 152 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 GRM6O15303 877 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 KLRC4O43908 158 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 FAM189A1O60320 539 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 FGF18O76093 207 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 POMCP01189 267 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 HARSP12081 509 aaKnown RBP12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 PBX3P40426 434 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 MATR3P43243 847 aaKnown RBP eCLIP12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 PLCB3Q01970 1234 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 KANK3Q6NY19 840 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 EPM2AIP1Q7L775 607 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 ZBTB45Q96K62 511 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 FAM193BQ96PV7 902 aaPredicted RBP12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 MSTO1Q9BUK6 570 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 HAPLN2Q9GZV7 340 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 GBP3Q9H0R5 595 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 EXOC1Q9NV70 894 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 SPG21Q9NZD8 308 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 KLK14Q9P0G3 267 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 DNAJB4Q9UDY4 337 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 STYXL1Q9Y6J8 313 aa12.8□□□□□ -0.36
TRAFD1-209ENST00000552896 PLXNA3P51805 1871 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 OGTO15294 1046 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 GABBR2O75899 941 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 DDHD2O94830 711 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 GALTP07902 379 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 CLTAP09496 248 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 SLC11A1P49279 550 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 KCNA1Q09470 495 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 TUSC3Q13454 348 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 TPRNQ4KMQ1 711 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 XKR4Q5GH76 650 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 SLFN12LQ6IEE8 588 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 ALKAL1Q6UXT8 129 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 COLGALT2Q8IYK4 626 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 ENGASEQ8NFI3 743 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 SPPL3Q8TCT6 385 aa12.79□□□□□ -0.36
TRAFD1-209ENST00000552896 HPS3Q969F9 1004 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms