RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	ARVCF	O00192	962 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	IPO5	O00410	1097 aa	Known RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	NOP56	O00567	594 aa	Known RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	PPFIA4	O75335	1185 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	MYL3	P08590	195 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	GSTP1	P09211	210 aa	Known RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZNF286B	P0CG31	522 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	AR	P10275	920 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	FOSL1	P15407	271 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	CYP3A7	P24462	503 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZNF76	P36508	570 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	CDK7	P50613	346 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	GP2	P55259	537 aa	Known RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	PSMC6	P62333	389 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	ITGB3BP	Q13352	177 aa	Predicted RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	CUL4A	Q13619	759 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	ITGA7	Q13683	1181 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRIM29	Q14134	588 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	NONO	Q15233	471 aa	Known RBP eCLIP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	INF2	Q27J81	1249 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRIM60	Q495X7	471 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	PRR16	Q569H4	304 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	MOXD1	Q6UVY6	613 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	PLA2G4D	Q86XP0	818 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	DIS3L2	Q8IYB7	885 aa	Known RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	C7orf61	Q8IZ16	206 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	SLC43A3	Q8NBI5	491 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	FBXO18	Q8NFZ0	1043 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	KAT2B	Q92831	832 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	C8orf76	Q96K31	380 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	MBOAT7	Q96N66	472 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	TOX2	Q96NM4	488 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	GPR20	Q99678	358 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	MTG1	Q9BT17	334 aa	Predicted RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	SEZ6L	Q9BYH1	1024 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	GSX1	Q9H4S2	264 aa	Predicted RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	AGO4	Q9HCK5	861 aa	Known RBP	7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	ATP11B	Q9Y2G3	1177 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	KIF3A	Q9Y496	699 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	TELO2	Q9Y4R8	837 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	NR2E3	Q9Y5X4	410 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	EYS	Q5T1H1	3165 aa		7.52	□□□□□ -1.21
CNOT2-238	ENST00000552422	BTBD18	B2RXH4	712 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422		H0YGN5	161 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	HAS3	O00219	553 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	TMPRSS2	O15393	492 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	SORBS3	O60504	671 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	PQBP1	O60828	265 aa	Known RBP	7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	LGALS2	P05162	132 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	SLFN14	P0C7P3	912 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	GCFC2	P16383	781 aa	Known RBP	7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	TLE2	Q04725	743 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422		Q4G0T1	1027 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	EARS2	Q5JPH6	523 aa	Known RBP	7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	NFRKB	Q6P4R8	1299 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	PIK3AP1	Q6ZUJ8	805 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	NEK8	Q86SG6	692 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	FAM126B	Q8IXS8	530 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	FAM184A	Q8NB25	1140 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	SNX21	Q969T3	373 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	WDR89	Q96FK6	387 aa	Predicted RBP	7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	SDF4	Q9BRK5	362 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	C16orf70	Q9BSU1	422 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	KATNAL1	Q9BW62	490 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	KRTAP4-8	Q9BYQ9	185 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	PDLIM7	Q9NR12	457 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	SLC9A2	Q9UBY0	812 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	CHD9	Q3L8U1	2897 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	TRANK1	O15050	2925 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	EMSY	Q7Z589	1322 aa		7.51	□□□□□ -1.21
CNOT2-238	ENST00000552422	FAM170B	A6NMN3	283 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	DCDC2C	A8MYV0	355 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	MSH4	O15457	936 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	CYP26A1	O43174	497 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	SLC37A4	O43826	429 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	ZNF862	O60290	1169 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	B4GALT4	O60513	344 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	TDP2	O95551	362 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	WNT11	O96014	354 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	CCNE2	O96020	404 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	CD4	P01730	458 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	CLTB	P09497	229 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	U2AF2	P26368	475 aa	Known RBP eCLIP	7.5	□□□□□ -1.21	8e-8	■□□□□ 10.6
CNOT2-238	ENST00000552422	GJB2	P29033	226 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	TCF7	P36402	384 aa	Predicted RBP	7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	ACTR2	P61160	394 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	GUCY1B3	Q02153	619 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	SP4	Q02446	784 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	ID3	Q02535	119 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	SAFB	Q15424	915 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	KIAA0753	Q2KHM9	967 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	LETM2	Q2VYF4	491 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	PPP4R3A	Q6IN85	833 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	SESTD1	Q86VW0	696 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	SULF2	Q8IWU5	870 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	ETNPPL	Q8TBG4	499 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	FBF1	Q8TES7	1133 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	SLC5A5	Q92911	643 aa		7.5	□□□□□ -1.21
CNOT2-238	ENST00000552422	ASB16	Q96NS5	453 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms