RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 EVLQ9UI08 416 aaPredicted RBP5.99□□□□□ -1.45
CCDC38-208ENST00000549876 PRSS50Q9UI38 385 aa5.99□□□□□ -1.45
CCDC38-208ENST00000549876 TBKBP1A7MCY6 615 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 B5MCH6 92 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 SPDEFO95238 335 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 ESRRBO95718 433 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 BPIP17213 487 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 MPLP40238 635 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 ERCC6LQ2NKX8 1250 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 LMBR1LQ6UX01 489 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 NOP9Q86U38 636 aaKnown RBP5.98□□□□□ -1.45
CCDC38-208ENST00000549876 RASSF3Q86WH2 238 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 SLC5A5Q92911 643 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 MAPRE3Q9UPY8 281 aa5.98□□□□□ -1.45
CCDC38-208ENST00000549876 KDM1AO60341 852 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 CLEC2LP0C7M8 214 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 SPATA31D3P0C874 917 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 CDK4P11802 303 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 MGAT1P26572 445 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 CXCR5P32302 372 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 PLA2G5P39877 138 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 GYS2P54840 703 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 PDCD1Q15116 288 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 DDB1Q16531 1140 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 BMT2Q1RMZ1 405 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 C19orf54Q5BKX5 351 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 PAPD7Q5XG87 772 aaKnown RBP5.97□□□□□ -1.45
CCDC38-208ENST00000549876 EFCAB12Q6NXP0 572 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 SPATA31D4Q6ZUB0 917 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 RNF180Q86T96 592 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 C11orf74Q86VG3 221 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 GLB1L2Q8IW92 636 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 CDC5LQ99459 802 aaKnown RBP5.97□□□□□ -1.45
CCDC38-208ENST00000549876 NEU1Q99519 415 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 LRFN3Q9BTN0 628 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 WNT8AQ9H1J5 351 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 RSAD1Q9HA92 442 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 MAP3K2Q9Y2U5 619 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 FPGT-TNNI3KV9GXZ4 949 aa5.97□□□□□ -1.45
CCDC38-208ENST00000549876 TMEM127O75204 238 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 HLA-DOAP06340 250 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 ID4P47928 161 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 ELLP55199 621 aaPredicted RBP5.96□□□□□ -1.46
CCDC38-208ENST00000549876 PPARAQ07869 468 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 SCAPQ12770 1279 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 DHCR24Q15392 516 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 ATP13A4Q4VNC1 1196 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 ABHD15Q6UXT9 468 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 THNSL2Q86YJ6 484 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 BOLLQ8N9W6 283 aaKnown RBP5.96□□□□□ -1.46
CCDC38-208ENST00000549876 RNF169Q8NCN4 708 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 SLC9A6Q92581 669 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 NELL1Q92832 810 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 USP15Q9Y4E8 981 aaPredicted RBP5.96□□□□□ -1.46
CCDC38-208ENST00000549876 MAST3O60307 1309 aa5.96□□□□□ -1.46
CCDC38-208ENST00000549876 RAB11FIP3O75154 756 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 MEF2AQ02078 507 aaPredicted RBP5.95□□□□□ -1.46
CCDC38-208ENST00000549876 RESTQ13127 1097 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 MPP3Q13368 585 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 CT83Q5H943 113 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 PITRM1Q5JRX3 1037 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 ZNF362Q5T0B9 420 aaPredicted RBP5.95□□□□□ -1.46
CCDC38-208ENST00000549876 SNX33Q8WV41 574 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 RSAD2Q8WXG1 361 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 TFAP2CQ92754 450 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 CEP95Q96GE4 821 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 POGKQ9P215 609 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 KCNG1Q9UIX4 513 aa5.95□□□□□ -1.46
CCDC38-208ENST00000549876 NOC2LQ9Y3T9 749 aaKnown RBP5.95□□□□□ -1.46
CCDC38-208ENST00000549876 TLDC2A0PJX2 215 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 NEMP1O14524 444 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 ITGA10O75578 1167 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 CFIP05156 583 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 LPLP06858 475 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 ARMC6Q6NXE6 501 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 STRA8Q7Z7C7 330 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 OR14C36Q8NHC7 312 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 TOPORSQ9NS56 1045 aaPredicted RBP5.94□□□□□ -1.46
CCDC38-208ENST00000549876 FRMD4BQ9Y2L6 1034 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 SALL3Q9BXA9 1300 aa5.94□□□□□ -1.46
CCDC38-208ENST00000549876 PRAMEF4O60810 478 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 C1RP00736 705 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 MFSD14BQ5SR56 506 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 AGAP9Q5VTM2 703 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 CLRN3Q8NCR9 226 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 MDM1Q8TC05 714 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 USP7Q93009 1102 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 KCTD10Q9H3F6 313 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 IFT22Q9H7X7 185 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 GPRC5DQ9NZD1 345 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 CDY2AQ9Y6F7 541 aa5.93□□□□□ -1.46
CCDC38-208ENST00000549876 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.92□□□□□ -1.46
CCDC38-208ENST00000549876 DRGXA6NNA5 263 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 ZEB2O60315 1214 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 GASTP01350 101 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 ITGAMP11215 1152 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 LGALS4P56470 323 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 DDX46Q7L014 1031 aaKnown RBP5.92□□□□□ -1.46
CCDC38-208ENST00000549876 UBR7Q8N806 425 aa5.92□□□□□ -1.46
CCDC38-208ENST00000549876 ZFP28Q8NHY6 868 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms