RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 CYP3A7P24462 503 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 PDIA3P30101 505 aaKnown RBP9.46□□□□□ -0.9
TROAP-208ENST00000548817 AK2P54819 239 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 NCBP1Q09161 790 aaKnown RBP9.46□□□□□ -0.9
TROAP-208ENST00000548817 FZD5Q13467 585 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 NTRK3Q16288 839 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 STPG1Q5TH74 334 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 MOXD1Q6UVY6 613 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 OTUD6AQ7L8S5 288 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 KRT25Q7Z3Z0 450 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 FAM177A1Q8N128 213 aaPredicted RBP9.46□□□□□ -0.9
TROAP-208ENST00000548817 DNASE1L2Q92874 299 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 LPPQ93052 612 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 GJA10Q969M2 543 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 KIF12Q96FN5 646 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 LOXL4Q96JB6 756 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 RPP25Q9BUL9 199 aaKnown RBP9.46□□□□□ -0.9
TROAP-208ENST00000548817 PHF20Q9BVI0 1012 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 NCOA5Q9HCD5 579 aaKnown RBP9.46□□□□□ -0.9
TROAP-208ENST00000548817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.46□□□□□ -0.9
TROAP-208ENST00000548817 FAM105AQ9NUU6 356 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 KANSL3Q9P2N6 904 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 DDX25Q9UHL0 483 aaKnown RBP9.46□□□□□ -0.9
TROAP-208ENST00000548817 WASF3Q9UPY6 502 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 FAN1Q9Y2M0 1017 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 CYP46A1Q9Y6A2 500 aa9.46□□□□□ -0.9
TROAP-208ENST00000548817 IGKV6-21A0A0C4DH24 114 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 NR1I2O75469 434 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 OFD1O75665 1012 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 ZMYND10O75800 440 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 CDKL5O76039 1030 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 PAPSS2O95340 614 aaPredicted RBP9.45□□□□□ -0.9
TROAP-208ENST00000548817 BAG4O95429 457 aaKnown RBP9.45□□□□□ -0.9
TROAP-208ENST00000548817 TDP2O95551 362 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 SSBP05455 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
TROAP-208ENST00000548817 HNRNPA1P09651 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
TROAP-208ENST00000548817 ZNF806P0C7X5 589 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 SRGAP2CP0DJJ0 459 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 CD72P21854 359 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 QARSP47897 775 aaKnown RBP9.45□□□□□ -0.9
TROAP-208ENST00000548817 GLUD2P49448 558 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 DRP2Q13474 957 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 RUFY3Q7L099 469 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 SRGAP1Q7Z6B7 1085 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 SKAP1Q86WV1 359 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 ZNF687Q8N1G0 1237 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 CNNM3Q8NE01 707 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 TCP11Q8WWU5 503 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 PSPC1Q8WXF1 523 aaKnown RBP9.45□□□□□ -0.9
TROAP-208ENST00000548817 ZCCHC14Q8WYQ9 949 aaKnown RBP9.45□□□□□ -0.9
TROAP-208ENST00000548817 GATA6Q92908 595 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 CEP170P1Q96L14 293 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 FAM20AQ96MK3 541 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 NAP1L4Q99733 375 aaKnown RBP9.45□□□□□ -0.9
TROAP-208ENST00000548817 SH2D3AQ9BRG2 576 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 AGXT2Q9BYV1 514 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 UBN1Q9NPG3 1134 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 DNAJB4Q9UDY4 337 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 PCDHB2Q9Y5E7 798 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 COL4A3BPQ9Y5P4 624 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 CNTNAP2Q9UHC6 1331 aa9.45□□□□□ -0.9
TROAP-208ENST00000548817 TMEM150BA6NC51 233 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 ASAP2O43150 1006 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 HRO43593 1189 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 GAS2O43903 313 aaKnown RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 ECI2O75521 394 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 ERLIN2O94905 339 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 P4HBP07237 508 aaKnown RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 POU2F2P09086 479 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 RFC5P40937 340 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 CXCL12P48061 93 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 EVCP57679 992 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 DSG1Q02413 1049 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 CREMQ03060 361 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 STK3Q13188 491 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 INF2Q27J81 1249 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 LILRA6Q6PI73 481 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 LONP2Q86WA8 852 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 KSR1Q8IVT5 923 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 HACE1Q8IYU2 909 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 RNF168Q8IYW5 571 aaPredicted RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 FAM160A2Q8N612 972 aaPredicted RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 DAGLBQ8NCG7 672 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 PRPF31Q8WWY3 499 aaKnown RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 FGF13Q92913 245 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 CCDC43Q96MW1 224 aaKnown RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 RSAD1Q9HA92 442 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 FNIP2Q9P278 1114 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 ANKFY1Q9P2R3 1169 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 WDFY3Q8IZQ1 3526 aa9.44□□□□□ -0.9
TROAP-208ENST00000548817 SMG1Q96Q15 3661 aaKnown RBP9.44□□□□□ -0.9
TROAP-208ENST00000548817 C2CD2LO14523 706 aa9.43□□□□□ -0.9
TROAP-208ENST00000548817 STBD1O95210 358 aa9.43□□□□□ -0.9
TROAP-208ENST00000548817 EFEMP2O95967 443 aa9.43□□□□□ -0.9
TROAP-208ENST00000548817 ITGA4P13612 1032 aa9.43□□□□□ -0.9
TROAP-208ENST00000548817 GCFC2P16383 781 aaKnown RBP9.43□□□□□ -0.9
TROAP-208ENST00000548817 HOXA6P31267 233 aa9.43□□□□□ -0.9
TROAP-208ENST00000548817 HOXA9P31269 272 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms