RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SYNPO2Q9UMS6 1093 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CEP83Q9Y592 693 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 PCDHB6Q9Y5E3 794 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 PCDHB1Q9Y5F3 818 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 PCDHA13Q9Y5I0 950 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CLASP1Q7Z460 1538 aa4.65□□□□□ -1.67
SFSWAP-211ENST00000542813 CHD1O14646 1710 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 A0A0U1RQG5 324 aaPredicted RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 TCRBV5S2A0A599 114 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 LRRC14BA6NHZ5 514 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 FAM171A2A8MVW0 826 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 ISM1B1AKI9 464 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 CCER2I3L3R5 266 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 USP2O75604 605 aaPredicted RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 MBD4O95243 580 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 CNOT4O95628 575 aaKnown RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 THP07101 528 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 KITP10721 976 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 VEGFAP15692 232 aaPredicted RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC7A1P30825 629 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 MC4RP32245 332 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 KIR2DL1P43626 348 aaPredicted RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 KIR2DL2P43627 348 aaPredicted RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 GPR15P49685 360 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 RTP1P59025 263 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 PPP3CAQ08209 521 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 CNGB1Q14028 1251 aaPredicted RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 NOLC1Q14978 699 aaKnown RBP eCLIP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 SLC35G1Q2M3R5 365 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 GAREM2Q75VX8 874 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 TMC6Q7Z403 805 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 CACNA2D3Q8IZS8 1091 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 FBXO15Q8NCQ5 510 aaPredicted RBP4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 C3orf20Q8ND61 904 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 OR10H5Q8NGA6 315 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 TTLL11Q8NHH1 800 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 GAB3Q8WWW8 586 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 FAM167AQ96KS9 214 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 AP5M1Q9H0R1 490 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 RASSF1Q9NS23 344 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 UCKL1Q9NWZ5 548 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 PALD1Q9ULE6 856 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 TAF6LQ9Y6J9 622 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 ERCC6L2Q5T890 1561 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 USP19O94966 1318 aa4.64□□□□□ -1.67
SFSWAP-211ENST00000542813 GAPVD1Q14C86 1478 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 A0A1W2PPC4 97 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 A0A1W2PQJ5 194 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 F8W8V4 182 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 hCG_1984214I3L0E3 225 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 MYO1FO00160 1098 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 EIF3FO00303 357 aaPredicted RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 NFIBO00712 420 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 SGSM2O43147 1006 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 SGTAO43765 313 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 PLA2G6O60733 806 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 OPHN1O60890 802 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 MSL3P1P0C860 447 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 FAHP16930 419 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 RXRGP48443 463 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ALDH9A1P49189 494 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 FMO1Q01740 532 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 MVKQ03426 396 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 GALNT1Q10472 559 aaPredicted RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 DBPQ10586 325 aaPredicted RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 G3BP1Q13283 466 aaKnown RBP eCLIP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 PDE1CQ14123 709 aaPredicted RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 PLS1Q14651 629 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 NOMO1Q15155 1222 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 TOMM20Q15388 145 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 TAF12Q16514 161 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ARL13BQ3SXY8 428 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ZACNQ401N2 412 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 CCDC178Q5BJE1 867 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 KLHDC7AQ5VTJ3 777 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 FAM180BQ6P0A1 224 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 C1orf122Q6ZSJ8 110 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 LCNL1Q6ZST4 164 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 CEP128Q6ZU80 1094 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 RFX8Q6ZV50 586 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 HEATR3Q7Z4Q2 680 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 MILR1Q7Z6M3 343 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 SESTD1Q86VW0 696 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 SUGP1Q8IWZ8 645 aaKnown RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 RHOT1Q8IXI2 618 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 GPATCH11Q8N954 259 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ATG16L2Q8NAA4 619 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 NETO2Q8NC67 525 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 GIMAP8Q8ND71 665 aaPredicted RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 NUP43Q8NFH3 380 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 CALML6Q8TD86 181 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 LINC01599Q8WXQ3 324 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 USP13Q92995 863 aaPredicted RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ZNF566Q969W8 418 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 ZSCAN31Q96LW9 406 aaPredicted RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 SEC62Q99442 399 aaKnown RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 PLCD4Q9BRC7 762 aa4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 NOL10Q9BSC4 688 aaKnown RBP4.63□□□□□ -1.67
SFSWAP-211ENST00000542813 PITHD1Q9GZP4 211 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms