RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 E2F6O75461 281 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 CASP1P29466 404 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 HIF1AQ16665 826 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 AP1ARQ63HQ0 302 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PDXDC1Q6P996 788 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 MTHFD1LQ6UB35 978 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PPM1NQ8N819 430 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 C18orf8Q96DM3 657 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SAAL1Q96ER3 474 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SPATS2LQ9NUQ6 558 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 MTMR4Q9NYA4 1195 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 INTUQ9ULD6 942 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 EIF3DO15371 548 aaKnown RBP eCLIP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 STAT5BP51692 787 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 C4orf22Q6V702 233 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 SPATA2LQ8IUW3 424 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PPHLN1Q8NEY8 458 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ATL2Q8NHH9 583 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 NCLNQ969V3 563 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 YY1AP1Q9H869 796 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PPCSQ9HAB8 311 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 LIMA1Q9UHB6 759 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 DGAT1O75907 488 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 BRAFP15056 766 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 CYP2C19P33261 490 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 GGCXP38435 758 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF543Q08ER8 600 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 RBBP7Q16576 425 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ANKRD40Q6AI12 368 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 C16orf86Q6ZW13 317 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 ASIC4Q96FT7 647 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 APEX2Q9UBZ4 518 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PCSK1NQ9UHG2 260 aa6.86□□□□□ -1.31
LSAMP-207ENST00000539563 TTC7AQ9ULT0 858 aaPredicted RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 G3BP2Q9UN86 482 aaKnown RBP6.86□□□□□ -1.31
LSAMP-207ENST00000539563 PREX1Q8TCU6 1659 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CDH6P55285 790 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 RBP5P82980 135 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 PDIA2Q13087 525 aaKnown RBP6.85□□□□□ -1.31
LSAMP-207ENST00000539563 OTUD5Q96G74 571 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 PHF20Q9BVI0 1012 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 KIF17Q9P2E2 1029 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 PIK3C2BO00750 1634 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 PRKCBP05771 671 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 HSPA9P38646 679 aaKnown RBP6.85□□□□□ -1.31
LSAMP-207ENST00000539563 KCNJ6P48051 423 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ARSEP51690 589 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 POU5F1BQ06416 359 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ZNF280CQ8ND82 737 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CATSPER1Q8NEC5 780 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 UVRAGQ9P2Y5 699 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 MOSPD1Q9UJG1 213 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 LMTK2Q8IWU2 1503 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CHUKO15111 745 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 IZUMO3Q5VZ72 239 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 RPAINQ86UA6 219 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 STAG2Q8N3U4 1231 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SLC13A1Q9BZW2 595 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 NEUROG2Q9H2A3 272 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ANLNQ9NQW6 1124 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 STOML1Q9UBI4 398 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SNX5Q9Y5X3 404 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ENTPD3O75355 529 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ALDH1A1P00352 501 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 KITP10721 976 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 LCP1P13796 627 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 PEX19P40855 299 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 RFC5P40937 340 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 NFRKBQ6P4R8 1299 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 IGDCC4Q8TDY8 1250 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 FOPNLQ96NB1 174 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 TGS1Q96RS0 853 aaKnown RBP6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ING2Q9H160 280 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CPVLQ9H3G5 476 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SMYD3Q9H7B4 428 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ZNRF3Q9ULT6 936 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 AXIN2Q9Y2T1 843 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 MRFAP1Q9Y605 127 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SSU72P8A0A1W2PR75 194 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 DIAPH2O60879 1101 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 AKR1B1P15121 316 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 GRIK1P39086 918 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ACADSBP45954 432 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ABCE1P61221 599 aaKnown RBP6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SLC18A3Q16572 532 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 SGSM1Q2NKQ1 1148 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 ANO5Q75V66 913 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 TRAPPC11Q7Z392 1133 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 FOXP3Q9BZS1 431 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 RNF181Q9P0P0 153 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 DIP2AQ14689 1571 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 FLT1P17948 1338 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CACNA1FO60840 1977 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CSPG5O95196 566 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CYBBP04839 570 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 KRT16P08779 473 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 TPI1P60174 286 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 IER5Q5VY09 327 aa6.85□□□□□ -1.31
LSAMP-207ENST00000539563 CC2D1AQ6P1N0 951 aaPredicted RBP6.85□□□□□ -1.31
LSAMP-207ENST00000539563 N4BP2L2Q92802 583 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms