RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KCNMB3Q9NPA1 279 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 KPNA6O60684 536 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 PBX2P40425 430 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 MYO1EQ12965 1108 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 CCDC62Q6P9F0 684 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 LENG9Q96B70 501 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 PGBD4Q96DM1 585 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 PCYT2Q99447 389 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 ACP6Q9NPH0 428 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 BLOC1S4Q9NUP1 217 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 FAM105AQ9NUU6 356 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 GCNT4Q9P109 453 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 PCDHGC5Q9Y5F6 944 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 CABIN1Q9Y6J0 2220 aa7.82□□□□□ -1.16
MSH6-209ENST00000538136 COL5A3P25940 1745 aaPredicted RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 ATP2A1O14983 1001 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 PLA2G6O60733 806 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 GJA1P17302 382 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 MYL7Q01449 175 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 EXOC3L4Q17RC7 722 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 MIB1Q86YT6 1006 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 FAM114A1Q8IWE2 563 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 UBA3Q8TBC4 463 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 ING5Q8WYH8 240 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 MTMR9Q96QG7 549 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 GAS2L1Q99501 681 aaPredicted RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 HSD17B14Q9BPX1 270 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 HINFPQ9BQA5 517 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 TMEM206Q9H813 350 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 DPYSL4O14531 572 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 XPOTO43592 962 aaKnown RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 CXCL14O95715 111 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 URODP06132 367 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 GAP43P17677 238 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 ATP4AP20648 1035 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 EFNA5P52803 228 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 CBX2Q14781 532 aaPredicted RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 ATL3Q6DD88 541 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 DCUN1D2Q6PH85 259 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 KAT2BQ92831 832 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 LRCH3Q96II8 777 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 MMTAG2Q9BU76 263 aaKnown RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 SIK2Q9H0K1 926 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 NKX2-4Q9H2Z4 354 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 TLE6Q9H808 572 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 ANKEF1Q9NU02 776 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 MAP3K20Q9NYL2 800 aaKnown RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 GTF3C4Q9UKN8 822 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 VAV3Q9UKW4 847 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 USP54Q70EL1 1684 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 DNAJC25-GNG10A0A024R161 153 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 UNCXA6NJT0 531 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 F8W810 466 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 DHX15O43143 795 aaKnown RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 RFC5P40937 340 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 FXR2P51116 673 aaKnown RBP eCLIP7.81□□□□□ -1.164e-7■■■■■ 30.2
MSH6-209ENST00000538136 GJA9P57773 515 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 DUOXA2Q1HG44 320 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 CTXN3Q4LDR2 81 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 CCDC157Q569K6 752 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 ACOT1Q86TX2 421 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 FMR1NBQ8N0W7 255 aaPredicted RBP7.81□□□□□ -1.16
MSH6-209ENST00000538136 VPS52Q8N1B4 723 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 IGSF22Q8N9C0 903 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 DAGLBQ8NCG7 672 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 NEK9Q8TD19 979 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 GDPD5Q8WTR4 605 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 LRRC4Q9HBW1 653 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 XPNPEP1Q9NQW7 623 aa7.81□□□□□ -1.16
MSH6-209ENST00000538136 ATF7P17544 494 aaPredicted RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 CTNNA2P26232 953 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 PLCB3Q01970 1234 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 PPIGQ13427 754 aaKnown RBP eCLIP7.8□□□□□ -1.16
MSH6-209ENST00000538136 PRSS55Q6UWB4 352 aaPredicted RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 CCDC186Q7Z3E2 898 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 SPRED2Q7Z698 418 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 CACTINQ8WUQ7 758 aaKnown RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 PPP2R3CQ969Q6 453 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 MTMR8Q96EF0 704 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 IL17RAQ96F46 866 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 CCSER1Q9C0I3 900 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 SAGE1Q9NXZ1 904 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 SIPA1L3O60292 1781 aaPredicted RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 DDX60Q8IY21 1712 aaKnown RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 VIRMAQ69YN4 1812 aaKnown RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 PRR23AA6NEV1 266 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 SLC4A1P02730 911 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 LCP1P13796 627 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 OR1D2P34982 312 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 FANCCQ00597 558 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 ADAT2Q7Z6V5 191 aaKnown RBP7.8□□□□□ -1.16
MSH6-209ENST00000538136 NT5C1BQ96P26 610 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 RBSNQ9H1K0 784 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 LZTFL1Q9NQ48 299 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 VCANP13611 3396 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 ADAMTSL1Q8N6G6 1762 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 MUC6Q6W4X9 2439 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 LACTBL1A8MY62 500 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 H0YCG3 227 aa7.8□□□□□ -1.16
MSH6-209ENST00000538136 LGR5O75473 907 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms