RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 MUTYHQ9UIF7 546 aa8.1□□□□□ -1.11
CCDC60-203ENST00000536742 PCDHA2Q9Y5H9 948 aa8.1□□□□□ -1.11
CCDC60-203ENST00000536742 ZHX2Q9Y6X8 837 aa8.1□□□□□ -1.11
CCDC60-203ENST00000536742 X6R8D5 127 aa8.1□□□□□ -1.11
CCDC60-203ENST00000536742 BRWD1Q9NSI6 2320 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 ARID1BQ8NFD5 2236 aaPredicted RBP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 ABLIM1O14639 778 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 WNT9AO14904 365 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 SMARCA5O60264 1052 aaPredicted RBP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 PQBP1O60828 265 aaKnown RBP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 FGBP02675 491 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 MAPK4P31152 587 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 RAP1GAPP47736 663 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 PABPC4Q13310 644 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 NR1I3Q14994 352 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 PROSER3Q2NL68 480 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 OLFML2BQ68BL8 750 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 MIGA2Q7L4E1 593 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 ANKRD33Q7Z3H0 272 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 PNISRQ8TF01 805 aaKnown RBP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 TMEM169Q96HH4 297 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 INTS4Q96HW7 963 aaKnown RBP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 MAGEB10Q96LZ2 347 aaPredicted RBP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 TNFRSF12AQ9NP84 129 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 TMOD2Q9NZR1 351 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 MORF4L1Q9UBU8 362 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 NDOR1Q9UHB4 597 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 COA3Q9Y2R0 106 aaPredicted RBP8.09□□□□□ -1.11
CCDC60-203ENST00000536742 AFG3L2Q9Y4W6 797 aa8.09□□□□□ -1.11
CCDC60-203ENST00000536742 B4E1Z4 1266 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 NPTXRO95502 500 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 CYBBP04839 570 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 MPOP05164 745 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 CSF2RAP15509 400 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 TRHRP34981 398 aaPredicted RBP8.08□□□□□ -1.12
CCDC60-203ENST00000536742 RABGGTBP53611 331 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 DMWDQ09019 674 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 FKBP1CQ5VVH2 108 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 KCNT2Q6UVM3 1135 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 MCM10Q7L590 875 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 MTDHQ86UE4 582 aaKnown RBP8.08□□□□□ -1.12
CCDC60-203ENST00000536742 CCAR1Q8IX12 1150 aaKnown RBP8.08□□□□□ -1.12
CCDC60-203ENST00000536742 USP33Q8TEY7 942 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 NINJ1Q92982 152 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 THUMPD2Q9BTF0 503 aaKnown RBP8.08□□□□□ -1.12
CCDC60-203ENST00000536742 GULP1Q9UBP9 304 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 NUDT5Q9UKK9 219 aa8.08□□□□□ -1.12
CCDC60-203ENST00000536742 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 BLACEA4D250 179 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 OR14I1A6ND48 311 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 FAM47E-STBD1D6RA91 191 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 ARVCFO00192 962 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 GSTA4O15217 222 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 LCP1P13796 627 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 MYOGP15173 224 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 SDHBP21912 280 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 BCL6P41182 706 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 SLC6A11P48066 632 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 EIF4A1P60842 406 aaKnown RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 GUCY1A3Q02108 690 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 PAK1Q13153 545 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 PAQR3Q6TCH7 311 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 SYDE1Q6ZW31 735 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 CEP68Q76N32 757 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 DCP2Q8IU60 420 aaKnown RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 PLEKHO2Q8TD55 490 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 ARNTL2Q8WYA1 636 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 TRMT2BQ96GJ1 504 aaKnown RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 DIRC2Q96SL1 478 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 SIN3AQ96ST3 1273 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 ANKRD2Q9GZV1 360 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 EPB41L1Q9H4G0 881 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 NSUN3Q9H649 340 aaKnown RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 CERS4Q9HA82 394 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 TRIM39Q9HCM9 518 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 IL23AQ9NPF7 189 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 CLDND1Q9NY35 253 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 MARCH2Q9P0N8 246 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 MAGEC2Q9UBF1 373 aaPredicted RBP8.07□□□□□ -1.12
CCDC60-203ENST00000536742 RWDD3Q9Y3V2 267 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 SLC4A7Q9Y6M7 1214 aa8.07□□□□□ -1.12
CCDC60-203ENST00000536742 EPOPA6NHQ4 379 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 C22orf46C9J442 243 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 PPP1R12AO14974 1030 aaPredicted RBP8.06□□□□□ -1.12
CCDC60-203ENST00000536742 HTATSF1O43719 755 aaKnown RBP8.06□□□□□ -1.12
CCDC60-203ENST00000536742 FUCA1P04066 466 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 CA3P07451 260 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 GLI4P10075 376 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 IL1R1P14778 569 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 GRK2P25098 689 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 GRK3P35626 688 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 VCPP55072 806 aaKnown RBP8.06□□□□□ -1.12
CCDC60-203ENST00000536742 AIMP1Q12904 312 aaKnown RBP8.06□□□□□ -1.12
CCDC60-203ENST00000536742 CBX2Q14781 532 aaPredicted RBP8.06□□□□□ -1.12
CCDC60-203ENST00000536742 EGFLAMQ63HQ2 1017 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 BICRALQ6AI39 1079 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
CCDC60-203ENST00000536742 FRMD5Q7Z6J6 570 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms