RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 EPN2O95208 641 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 PAPSS2O95340 614 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-206ENST00000535290 FOSP01100 380 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-206ENST00000535290 CYP21A2P08686 494 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 FCARP24071 287 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 HOXA9P31269 272 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 MLH1P40692 756 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 RAP1GAPP47736 663 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 GNAQP50148 359 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 SCNN1GP51170 649 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 CDC42EP1Q00587 391 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 SART3Q15020 963 aaKnown RBP9.31□□□□□ -0.92
CLIP1-206ENST00000535290 WDR44Q5JSH3 913 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 SH3PXD2AQ5TCZ1 1133 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 WWC2Q6AWC2 1192 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 C19orf48Q6RUI8 117 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 Q6ZS52 159 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 KBTBD6Q86V97 674 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 RAB11FIP4Q86YS3 637 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 RHPN2Q8IUC4 686 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 SMG8Q8ND04 991 aaKnown RBP9.31□□□□□ -0.92
CLIP1-206ENST00000535290 SLC7A14Q8TBB6 771 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 ELSPBP1Q96BH3 223 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 LOXL4Q96JB6 756 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 ZFP42Q96MM3 310 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 NLRP4Q96MN2 994 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 CEP89Q96ST8 783 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 COLEC11Q9BWP8 271 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 INO80BQ9C086 356 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-206ENST00000535290 IFT122Q9HBG6 1241 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 ZNF334Q9HCZ1 680 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-206ENST00000535290 RIC8AQ9NPQ8 531 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 TBC1D22BQ9NU19 505 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 GDE1Q9NZC3 331 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 SUCLA2Q9P2R7 463 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-206ENST00000535290 RCAN3Q9UKA8 241 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 SAMM50Q9Y512 469 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 DMXL2Q8TDJ6 3036 aa9.31□□□□□ -0.92
CLIP1-206ENST00000535290 CEBPBP17676 345 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 CCNE1P24864 410 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 MPLP40238 635 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 CREMQ03060 361 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 PTGDRQ13258 359 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 FAM78AQ5JUQ0 283 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 AXDND1Q5T1B0 1012 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-206ENST00000535290 KIAA1211LQ6NV74 962 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 RALYLQ86SE5 291 aaKnown RBP9.3□□□□□ -0.92
CLIP1-206ENST00000535290 ZNF410Q86VK4 478 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 WDR5BQ86VZ2 330 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 MAP4K3Q8IVH8 894 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 CRYGNQ8WXF5 182 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 BBC3Q96PG8 261 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-206ENST00000535290 TRMT61BQ9BVS5 477 aaKnown RBP9.3□□□□□ -0.92
CLIP1-206ENST00000535290 MINDY3Q9H8M7 445 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 DISC1Q9NRI5 854 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 CACNG4Q9UBN1 327 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 TCEAL9Q9UHQ7 104 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 ADAM28Q9UKQ2 775 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 HES2Q9Y543 173 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 PCDHB13Q9Y5F0 798 aa9.3□□□□□ -0.92
CLIP1-206ENST00000535290 ITPR1Q14643 2758 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 WDR64B1ANS9 1081 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 E7EWF7 191 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 HYAL3O43820 417 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-206ENST00000535290 NR1I2O75469 434 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 STBD1O95210 358 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 RHOP08100 348 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 POU2F2P09086 479 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 ITGA4P13612 1032 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 GDI1P31150 447 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 HOXA6P31267 233 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 PXNP49023 591 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-206ENST00000535290 ADCY7P51828 1080 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 NAPAP54920 295 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 MTERF2Q49AM1 385 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 CACNA2D4Q7Z3S7 1137 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 PDZD3Q86UT5 571 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 MB21D2Q8IYB1 491 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-206ENST00000535290 GSTCDQ8NEC7 633 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 NCOA7Q8NI08 942 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 LNX1Q8TBB1 728 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-206ENST00000535290 IRF7Q92985 503 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 EDEM2Q9BV94 578 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 EIF2AQ9BY44 585 aaKnown RBP9.29□□□□□ -0.92
CLIP1-206ENST00000535290 ZFP14Q9HCL3 533 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 UBN1Q9NPG3 1134 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 TRPV5Q9NQA5 729 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 GPSM3Q9Y4H4 160 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 IPPQ9Y573 584 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 PCDHGA5Q9Y5G8 931 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 NOTCH4Q99466 2003 aa9.29□□□□□ -0.92
CLIP1-206ENST00000535290 MTCL1Q9Y4B5 1905 aaKnown RBP9.29□□□□□ -0.92
CLIP1-206ENST00000535290 SMCO2A6NFE2 343 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 ADAMTS3O15072 1205 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 EXTL3O43909 919 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 TADA2AO75478 443 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 RPP40O75818 363 aaKnown RBP9.28□□□□□ -0.92
CLIP1-206ENST00000535290 CYP3A4P08684 503 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 CEACAM1P13688 526 aa9.28□□□□□ -0.92
CLIP1-206ENST00000535290 SOX9P48436 509 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms