RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 CPB2Q96IY4 423 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 ACO2Q99798 780 aaKnown RBP11.43□□□□□ -0.58
CSDE1-217ENST00000534699 KMT5AQ9NQR1 393 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 IGSF9Q9P2J2 1179 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 DNAJB4Q9UDY4 337 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 STK17AQ9UEE5 414 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 PARP2Q9UGN5 583 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
CSDE1-217ENST00000534699 ARHGEF37A1IGU5 675 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 XPOTO43592 962 aaKnown RBP11.42□□□□□ -0.58
CSDE1-217ENST00000534699 GLUD1P00367 558 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 MLH1P40692 756 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 OR1G1P47890 313 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 FOSBP53539 338 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 GSTCDQ8NEC7 633 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 BORCS6Q96GS4 357 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 MMTAG2Q9BU76 263 aaKnown RBP11.42□□□□□ -0.58
CSDE1-217ENST00000534699 AVENQ9NQS1 362 aaPredicted RBP11.42□□□□□ -0.58
CSDE1-217ENST00000534699 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 CITO14578 2027 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 MYH15Q9Y2K3 1946 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 PLXNA3P51805 1871 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 POMCP01189 267 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 CYP3A5P20815 502 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 NPTX2P47972 431 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 SCNN1GP51170 649 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 NT5DC1Q5TFE4 455 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 MCTP1Q6DN14 999 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 MPZL3Q6UWV2 235 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 TRIM67Q6ZTA4 783 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 TDRD5Q8NAT2 981 aaKnown RBP11.42□□□□□ -0.58
CSDE1-217ENST00000534699 BSNDQ8WZ55 320 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 VN1R3Q9BXE9 311 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 NXF3Q9H4D5 531 aaKnown RBP11.42□□□□□ -0.58
CSDE1-217ENST00000534699 SEL1LQ9UBV2 794 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 SORCS3Q9UPU3 1222 aa11.42□□□□□ -0.58
CSDE1-217ENST00000534699 CHD9Q3L8U1 2897 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 SYN3O14994 580 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 PER2O15055 1255 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 HIP1RO75146 1068 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 TADA2AO75478 443 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 TOM1L1O75674 476 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 IBSPP21815 317 aaPredicted RBP11.41□□□□□ -0.58
CSDE1-217ENST00000534699 ZNF131P52739 623 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 SLC12A3P55017 1021 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 NCKAP1LP55160 1127 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 MAPK7Q13164 816 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 ALCAMQ13740 583 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 LILRA6Q6PI73 481 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 ALKAL1Q6UXT8 129 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 BCL7CQ8WUZ0 217 aaPredicted RBP11.41□□□□□ -0.58
CSDE1-217ENST00000534699 SNX21Q969T3 373 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 LRRC27Q9C0I9 530 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 C11orf16Q9NQ32 467 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 MEIS3P2A8K0S8 358 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 ADRB2P07550 413 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 CNPP09543 421 aaKnown RBP11.41□□□□□ -0.58
CSDE1-217ENST00000534699 UBA7P41226 1012 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 NAB2Q15742 525 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 FAM122AQ96E09 287 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 PPP1R10Q96QC0 940 aaKnown RBP11.41□□□□□ -0.58
CSDE1-217ENST00000534699 GPRC5CQ9NQ84 441 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 MIOSQ9NXC5 875 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 CNTN3Q9P232 1028 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 DERAQ9Y315 318 aa11.41□□□□□ -0.58
CSDE1-217ENST00000534699 TRANK1O15050 2925 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 H7C4K7 107 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 B4GALT5O43286 388 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 RECQL4O94761 1208 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 FGFR3P22607 806 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 ECM1Q16610 540 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 ANKS3Q6ZW76 656 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 PNMA5Q96PV4 448 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 TTPALQ9BTX7 342 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 GBP3Q9H0R5 595 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 RNF39Q9H2S5 420 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 EPS15L1Q9UBC2 864 aa11.4□□□□□ -0.58
CSDE1-217ENST00000534699 NT5C1B-RDH14C9J2C7 533 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 MICAL2O94851 1124 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 PLA2G4BP0C869 781 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 TXLNAP40222 546 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 MCL1Q07820 350 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 RAB33AQ14088 237 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 IL17AQ16552 155 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 CCDC149Q6ZUS6 474 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 DAW1Q8N136 415 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 ACAP3Q96P50 834 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 KCNH3Q9ULD8 1083 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 KMT2EQ8IZD2 1858 aa11.4□□□□□ -0.59
CSDE1-217ENST00000534699 TMEM221A6NGB7 291 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 M0R296 226 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 PTGESO14684 152 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 GAP43P17677 238 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 CDC25AP30304 524 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 PEX3P56589 373 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 MTMR3Q13615 1198 aa11.39□□□□□ -0.59
CSDE1-217ENST00000534699 SLFN12LQ6IEE8 588 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms