RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 MEFVO15553 781 aaPredicted RBP11.92□□□□□ -0.5
CSDE1-215ENST00000533818 RHOP08100 348 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 GRM4Q14833 912 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 MCMDC2Q4G0Z9 681 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 AXDND1Q5T1B0 1012 aaPredicted RBP11.92□□□□□ -0.5
CSDE1-215ENST00000533818 VITQ6UXI7 678 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 MRPL10Q7Z7H8 261 aaKnown RBP11.92□□□□□ -0.5
CSDE1-215ENST00000533818 PIP4P1Q86T03 277 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 SYNPOQ8N3V7 929 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 PI4K2BQ8TCG2 481 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 FAM200AQ8TCP9 573 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 CSGALNACT1Q8TDX6 532 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 CLSTN3Q9BQT9 956 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 C8orf33Q9H7E9 229 aaPredicted RBP11.92□□□□□ -0.5
CSDE1-215ENST00000533818 LY9Q9HBG7 655 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 SLC8A2Q9UPR5 921 aa11.92□□□□□ -0.5
CSDE1-215ENST00000533818 SLC38A8A6NNN8 435 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 NRG2O14511 850 aaPredicted RBP11.91□□□□□ -0.5
CSDE1-215ENST00000533818 DCLK1O15075 740 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 SOX9P48436 509 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 UVSSAQ2YD98 709 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 CCNI2Q6ZMN8 369 aaPredicted RBP11.91□□□□□ -0.5
CSDE1-215ENST00000533818 CATSPER4Q7RTX7 472 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 DEPDC1BQ8WUY9 529 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 INO80BQ9C086 356 aaPredicted RBP11.91□□□□□ -0.5
CSDE1-215ENST00000533818 PCDHA6Q9UN73 950 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 PCDHA8Q9Y5H6 950 aa11.91□□□□□ -0.5
CSDE1-215ENST00000533818 MAFBQ9Y5Q3 323 aaPredicted RBP11.91□□□□□ -0.5
CSDE1-215ENST00000533818 PCNX2A6NKB5 2137 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 URB1O60287 2271 aaKnown RBP11.9□□□□□ -0.5
CSDE1-215ENST00000533818 ZNF862O60290 1169 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 VIPR2P41587 438 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 MAPK8P45983 427 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 CDC42EP1Q00587 391 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 KCNC4Q03721 635 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 SRSF1Q07955 248 aaKnown RBP eCLIP11.9□□□□□ -0.5
CSDE1-215ENST00000533818 DSC1Q08554 894 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
CSDE1-215ENST00000533818 UBE2SQ16763 222 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 TXNDC11Q6PKC3 985 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 ZNF589Q86UQ0 364 aaPredicted RBP11.9□□□□□ -0.5
CSDE1-215ENST00000533818 LSM14AQ8ND56 463 aaKnown RBP11.9□□□□□ -0.5
CSDE1-215ENST00000533818 ASB16Q96NS5 453 aa11.9□□□□□ -0.5
CSDE1-215ENST00000533818 AVENQ9NQS1 362 aaPredicted RBP11.9□□□□□ -0.5
CSDE1-215ENST00000533818 BAZ2BQ9UIF8 2168 aaKnown RBP11.89□□□□□ -0.51
CSDE1-215ENST00000533818 TEX15Q9BXT5 2789 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 A0A087WZ62 844 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 A0A0D9SFI3 127 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 CCDC194A0A1B0GVG4 234 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 UPK3BL1B0FP48 263 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 UPK3BL2E5RIL1 263 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 SPECC1L-ADORA2AF8WAN1 911 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 ARNTLO00327 626 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 GBP1P32455 592 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 FAM193AP78312 1265 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 LMAN2Q12907 356 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 SEMA3BQ13214 749 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 CCINQ13939 588 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 KARSQ15046 597 aaKnown RBP11.89□□□□□ -0.51
CSDE1-215ENST00000533818 PON2Q15165 354 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 CEP55Q53EZ4 464 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 RTP2Q5QGT7 225 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 PKN3Q6P5Z2 889 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 RALGPS2Q86X27 583 aaPredicted RBP11.89□□□□□ -0.51
CSDE1-215ENST00000533818 CAMKK1Q8N5S9 505 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 SMARCD2Q92925 531 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 RRP36Q96EU6 259 aaKnown RBP11.89□□□□□ -0.51
CSDE1-215ENST00000533818 FDXACB1Q9BRP7 624 aaPredicted RBP11.89□□□□□ -0.51
CSDE1-215ENST00000533818 UBN1Q9NPG3 1134 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 ADAM28Q9UKQ2 775 aa11.89□□□□□ -0.51
CSDE1-215ENST00000533818 ASCC3Q8N3C0 2202 aaKnown RBP11.88□□□□□ -0.51
CSDE1-215ENST00000533818 A0A087WV48 116 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.88□□□□□ -0.51
CSDE1-215ENST00000533818 MYBPHLA2RUH7 354 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 ARL5CA6NH57 179 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 ADAM12O43184 909 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 ATG13O75143 517 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 TADA2AO75478 443 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 PTPN2P17706 415 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 CTHP32929 405 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 SEC23AQ15436 765 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 PSMD5Q16401 504 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 RTL10Q7L3V2 364 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 CYP2U1Q7Z449 544 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 CEP57Q86XR8 500 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 MFSD6LQ8IWD5 586 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 LNX1Q8TBB1 728 aaPredicted RBP11.88□□□□□ -0.51
CSDE1-215ENST00000533818 RABGGTAQ92696 567 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 TCEAL4Q96EI5 215 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 FAM167AQ96KS9 214 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 GAD1Q99259 594 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 TTPALQ9BTX7 342 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 KRT23Q9C075 422 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 DDX19BQ9UMR2 479 aa11.88□□□□□ -0.51
CSDE1-215ENST00000533818 WDR27A2RRH5 827 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 MEIS1O00470 390 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 ZNF197O14709 1029 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 CAPN9O14815 690 aa11.87□□□□□ -0.51
CSDE1-215ENST00000533818 NTRK1P04629 796 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms