RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 NSUN7Q8NE18 718 aaKnown RBP8.66□□□□□ -1.02
CASP4-212ENST00000533730 KLHL6Q8WZ60 621 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 CDHR1Q96JP9 859 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 HTATIP2Q9BUP3 242 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 CACNA2D2Q9NY47 1150 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 GMIPQ9P107 970 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 VPS54Q9P1Q0 977 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 REV1Q9UBZ9 1251 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 TCEAL9Q9UHQ7 104 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 PCDHA6Q9UN73 950 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 PCDHA8Q9Y5H6 950 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 KIAA0100Q14667 2235 aaKnown RBP8.66□□□□□ -1.02
CASP4-212ENST00000533730 MCM3APO60318 1980 aa8.66□□□□□ -1.02
CASP4-212ENST00000533730 MAFGO15525 162 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 FIBPO43427 364 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 ADAMTS4O75173 837 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 CTDNEP1O95476 244 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 GH1P01241 217 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 ITGB2P05107 769 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 C6orf222P0C671 652 aaPredicted RBP8.65□□□□□ -1.02
CASP4-212ENST00000533730 TXNP10599 105 aaKnown RBP8.65□□□□□ -1.02
CASP4-212ENST00000533730 NME1P15531 152 aaKnown RBP8.65□□□□□ -1.02
CASP4-212ENST00000533730 L1CAMP32004 1257 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 ICAM3P32942 547 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 SREBF1P36956 1147 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 CPT1AP50416 773 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 NFKB2Q00653 900 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 TRIM29Q14134 588 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 INPP5AQ14642 412 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 PRRT3Q5FWE3 981 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 ANO1Q5XXA6 986 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 KIAA1211LQ6NV74 962 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 CCDC62Q6P9F0 684 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 LRFN4Q6PJG9 635 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 SEPT14Q6ZU15 432 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 NLRC3Q7RTR2 1065 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 TLK2Q86UE8 772 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 CCDC83Q8IWF9 413 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 GIMAP8Q8ND71 665 aaPredicted RBP8.65□□□□□ -1.02
CASP4-212ENST00000533730 IL31RAQ8NI17 732 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 GPBAR1Q8TDU6 330 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 PLPPR2Q96GM1 343 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 INPP4AQ96PE3 977 aaPredicted RBP8.65□□□□□ -1.02
CASP4-212ENST00000533730 SLC9A7Q96T83 725 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 ALG1Q9BT22 464 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 ANO3Q9BYT9 981 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 C11orf49Q9H6J7 331 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 PDGFCQ9NRA1 345 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 MAGEC2Q9UBF1 373 aaPredicted RBP8.65□□□□□ -1.02
CASP4-212ENST00000533730 HTTP42858 3142 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 FRMPD3Q5JV73 1810 aa8.65□□□□□ -1.02
CASP4-212ENST00000533730 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.64□□□□□ -1.03
CASP4-212ENST00000533730 SLC22A31A6NKX4 558 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 LINC01387J3KSC0 135 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 DYNC1LI2O43237 492 aaPredicted RBP8.64□□□□□ -1.03
CASP4-212ENST00000533730 KPNA6O60684 536 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 RFPL3O75679 317 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 CABYRO75952 493 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 PGK1P00558 417 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 CYP3A4P08684 503 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 COL6A1P12109 1028 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 SOX5P35711 763 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 RAC1P63000 192 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 MRPS9P82933 396 aaKnown RBP8.64□□□□□ -1.03
CASP4-212ENST00000533730 NEDD9Q14511 834 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 GRIK4Q16099 956 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 FSCN1Q16658 493 aaKnown RBP8.64□□□□□ -1.03
CASP4-212ENST00000533730 GJC2Q5T442 439 aaPredicted RBP8.64□□□□□ -1.03
CASP4-212ENST00000533730 JAKMIP3Q5VZ66 844 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 NIPA1Q7RTP0 329 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 BLIDQ8IZY5 108 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 TMEM151AQ8N4L1 468 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 FAM184AQ8NB25 1140 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 KLHDC9Q8NEP7 349 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 OR6J1Q8NGC5 347 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 PAWRQ96IZ0 340 aaKnown RBP8.64□□□□□ -1.03
CASP4-212ENST00000533730 TMX3Q96JJ7 454 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 EXOC2Q96KP1 924 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 SENP7Q9BQF6 1050 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 PHF20Q9BVI0 1012 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 SEZ6LQ9BYH1 1024 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 EPN3Q9H201 632 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 MCM8Q9UJA3 840 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 UBIAD1Q9Y5Z9 338 aa8.64□□□□□ -1.03
CASP4-212ENST00000533730 DDX49Q9Y6V7 483 aaKnown RBP8.64□□□□□ -1.03
CASP4-212ENST00000533730 H3BRJ5 948 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 DLL1O00548 723 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 SOX1O00570 391 aaPredicted RBP8.63□□□□□ -1.03
CASP4-212ENST00000533730 ADCY6O43306 1168 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 FDPSP14324 419 aaKnown RBP8.63□□□□□ -1.03
CASP4-212ENST00000533730 PLCG1P19174 1290 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 USP11P51784 963 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 ACLYP53396 1101 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 SETQ01105 290 aaPredicted RBP8.63□□□□□ -1.03
CASP4-212ENST00000533730 SAFBQ15424 915 aaKnown RBP eCLIP8.63□□□□□ -1.03
CASP4-212ENST00000533730 KCNA10Q16322 511 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 CEP55Q53EZ4 464 aa8.63□□□□□ -1.03
CASP4-212ENST00000533730 ZC3H12BQ5HYM0 836 aaKnown RBP8.63□□□□□ -1.03
CASP4-212ENST00000533730 CCSAPQ6IQ19 270 aaPredicted RBP8.63□□□□□ -1.03
CASP4-212ENST00000533730 TXNDC11Q6PKC3 985 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms