RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 JADE3Q92613 823 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 HDAC10Q969S8 669 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 GPATCH3Q96I76 525 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 PLEKHG4BQ96PX9 1271 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 LSM14BQ9BX40 385 aaKnown RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 ASPSCR1Q9BZE9 553 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 SENP6Q9GZR1 1112 aaPredicted RBP3.64□□□□□ -1.83
ATM-220ENST00000533526 VPS11Q9H270 941 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 SPON1Q9HCB6 807 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 LANCL2Q9NS86 450 aa3.64□□□□□ -1.83
ATM-220ENST00000533526 TRIM24O15164 1050 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 ADCY6O43306 1168 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 PCDHGA12O60330 932 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 FZD7O75084 574 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 ALOX15P16050 662 aaPredicted RBP3.63□□□□□ -1.83
ATM-220ENST00000533526 RECQLP46063 649 aaPredicted RBP3.63□□□□□ -1.83
ATM-220ENST00000533526 CLRN1P58418 232 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 TUBA3CQ13748 450 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 PCBP2Q15366 365 aaKnown RBP eCLIP3.63□□□□□ -1.83
ATM-220ENST00000533526 ATP2B3Q16720 1220 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 ABCB5Q2M3G0 1257 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 BRDTQ58F21 947 aaPredicted RBP3.63□□□□□ -1.83
ATM-220ENST00000533526 RABL3Q5HYI8 236 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 MFSD14BQ5SR56 506 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 C1QL3Q5VWW1 255 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 TUBA3EQ6PEY2 450 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 XYLT1Q86Y38 959 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 TRMT2AQ8IZ69 625 aaKnown RBP3.63□□□□□ -1.83
ATM-220ENST00000533526 NRG4Q8WWG1 115 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 TFAP2CQ92754 450 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 HOXB13Q92826 284 aaPredicted RBP3.63□□□□□ -1.83
ATM-220ENST00000533526 FAM193BQ96PV7 902 aaPredicted RBP3.63□□□□□ -1.83
ATM-220ENST00000533526 CEP89Q96ST8 783 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 NDC1Q9BTX1 674 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 ZNF747Q9BV97 191 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 ZNF341Q9BYN7 854 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 CSRNP2Q9H175 543 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 DMRT3Q9NQL9 472 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 FAM30AQ9NZY2 134 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 CEP72Q9P209 647 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 POGKQ9P215 609 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 INTUQ9ULD6 942 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 PCDHGA9Q9Y5G4 932 aaKnown RBP3.63□□□□□ -1.83
ATM-220ENST00000533526 PCDHGA8Q9Y5G5 932 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 PCDHGA7Q9Y5G6 932 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 PCDHGA6Q9Y5G7 932 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 PCDHGA3Q9Y5H0 932 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 TNKSO95271 1327 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 ATRNL1Q5VV63 1379 aa3.63□□□□□ -1.83
ATM-220ENST00000533526 CXorf49A8MYA2 514 aaPredicted RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 FZD9O00144 591 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 SNUPNO95149 360 aaKnown RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 VCAM1P19320 739 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 C5AR1P21730 350 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 GUCY1A2P33402 732 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 PTGS2P35354 604 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 ADKP55263 362 aaKnown RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 TOB2Q14106 344 aaPredicted RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 SEPT2Q15019 361 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 LSM12Q3MHD2 195 aaKnown RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 ATXN7L2Q5T6C5 722 aaPredicted RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 OTUD7BQ6GQQ9 843 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 CRIP3Q6Q6R5 217 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 MIGA2Q7L4E1 593 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 DRC7Q8IY82 874 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 RPUSD2Q8IZ73 545 aaKnown RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 MIER2Q8N344 545 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 REPS2Q8NFH8 660 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 CHMP4CQ96CF2 233 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 CEP95Q96GE4 821 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 TEKT5Q96M29 485 aa3.62□□□□□ -1.83
ATM-220ENST00000533526 EIF2B4Q9UI10 523 aaKnown RBP3.62□□□□□ -1.83
ATM-220ENST00000533526 SGTAO43765 313 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 POMCP01189 267 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 C1SP09871 688 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 RAP2AP10114 183 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 ATP5JP18859 108 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 TACR2P21452 398 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 GDF5P43026 501 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 ZXDAP98168 799 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 CDC42EP1Q00587 391 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 UBXN2BQ14CS0 331 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 LCE5AQ5TCM9 118 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 ANKS6Q68DC2 871 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 RSPH3Q86UC2 560 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 ZBTB46Q86UZ6 589 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 RHOT1Q8IXI2 618 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 NLGN4YQ8NFZ3 816 aaPredicted RBP3.61□□□□□ -1.83
ATM-220ENST00000533526 CCHCR1Q8TD31 782 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 CACTINQ8WUQ7 758 aaKnown RBP3.61□□□□□ -1.83
ATM-220ENST00000533526 STON2Q8WXE9 905 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 DPF2Q92785 391 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 HAS1Q92839 578 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 COA7Q96BR5 231 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 PGBD4Q96DM1 585 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 MRI1Q9BV20 369 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
ATM-220ENST00000533526 CPEB1Q9BZB8 566 aaKnown RBP3.61□□□□□ -1.83
ATM-220ENST00000533526 REXO4Q9GZR2 422 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms