RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 CCDC181Q5TID7 509 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 CCDC174Q6PII3 467 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 FMNL3Q8IVF7 1028 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 COG1Q8WTW3 980 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 MTMR8Q96EF0 704 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 CFAP53Q96M91 514 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 JAM3Q9BX67 310 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 CARS2Q9HA77 564 aaKnown RBP8.38□□□□□ -1.07
SVIP-204ENST00000530199 THG1LQ9NWX6 298 aaKnown RBP8.38□□□□□ -1.07
SVIP-204ENST00000530199 HYPKQ9NX55 129 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 CWC25Q9NXE8 425 aaPredicted RBP8.38□□□□□ -1.07
SVIP-204ENST00000530199 LMCD1Q9NZU5 365 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 GULP1Q9UBP9 304 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 EBF1Q9UH73 591 aa8.38□□□□□ -1.07
SVIP-204ENST00000530199 PTPRZ1P23471 2315 aaPredicted RBP8.38□□□□□ -1.07
SVIP-204ENST00000530199 PRRC2BQ5JSZ5 2229 aaKnown RBP8.38□□□□□ -1.07
SVIP-204ENST00000530199 KBTBD13C9JR72 458 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 SNAP23O00161 211 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 PDE6AP16499 860 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 MAPK4P31152 587 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 EPHB1P54762 984 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 RBM10P98175 930 aaKnown RBP8.37□□□□□ -1.07
SVIP-204ENST00000530199 ARHGAP44Q17R89 818 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 GJC2Q5T442 439 aaPredicted RBP8.37□□□□□ -1.07
SVIP-204ENST00000530199 MFSD14CQ5VZR4 134 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 APOBEC3HQ6NTF7 200 aaKnown RBP8.37□□□□□ -1.07
SVIP-204ENST00000530199 SLCO6A1Q86UG4 719 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 CNTD1Q8N815 330 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 CHTF18Q8WVB6 975 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 TEKT1Q969V4 418 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 TRMT2BQ96GJ1 504 aaKnown RBP8.37□□□□□ -1.07
SVIP-204ENST00000530199 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 CCDC8Q9H0W5 538 aaPredicted RBP8.37□□□□□ -1.07
SVIP-204ENST00000530199 EMC7Q9NPA0 242 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 MARCH2Q9P0N8 246 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 TCEAL9Q9UHQ7 104 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 YBX2Q9Y2T7 364 aaKnown RBP8.37□□□□□ -1.07
SVIP-204ENST00000530199 A0A0G2JMZ2 1700 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 MYH3P11055 1940 aa8.37□□□□□ -1.07
SVIP-204ENST00000530199 ATRNL1Q5VV63 1379 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 PHIPQ8WWQ0 1821 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 DNAH14Q0VDD8 3507 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 ZNF521Q96K83 1311 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 A0A1W2PQ45 241 aaPredicted RBP8.36□□□□□ -1.07
SVIP-204ENST00000530199 A0A1W2PQY0 241 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 HOXB7P09629 217 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 SLC5A1P13866 664 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 FPR2P25090 351 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 CD96P40200 585 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 OCRLQ01968 901 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 TCF15Q12870 199 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 BNIP3Q12983 259 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 DUSP4Q13115 394 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 PPIGQ13427 754 aaKnown RBP eCLIP8.36□□□□□ -1.07
SVIP-204ENST00000530199 ATP13A4Q4VNC1 1196 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 CC2D1BQ5T0F9 858 aaKnown RBP8.36□□□□□ -1.07
SVIP-204ENST00000530199 OSTM1Q86WC4 334 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 TEX2Q8IWB9 1127 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 ANKS1AQ92625 1134 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 SPOCK3Q9BQ16 436 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 SPTLC3Q9NUV7 552 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 X6R8D5 127 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 ATRXP46100 2492 aa8.36□□□□□ -1.07
SVIP-204ENST00000530199 DMDP11532 3685 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 LOC285556D6RIA3 1793 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 GAKO14976 1311 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 TRIOO75962 3097 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 C22orf46C9J442 243 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 TIMP1P01033 207 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 ZGLP1P0C6A0 271 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 KIR2DL1P43626 348 aaPredicted RBP8.35□□□□□ -1.07
SVIP-204ENST00000530199 KIR2DL2P43627 348 aaPredicted RBP8.35□□□□□ -1.07
SVIP-204ENST00000530199 KPNA1P52294 538 aaPredicted RBP8.35□□□□□ -1.07
SVIP-204ENST00000530199 MCL1Q07820 350 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 CREB3L3Q68CJ9 461 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 MFSD5Q6N075 450 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 PSRC1Q6PGN9 363 aaPredicted RBP8.35□□□□□ -1.07
SVIP-204ENST00000530199 BMP8AQ7Z5Y6 402 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 GPR142Q7Z601 462 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 C11orf74Q86VG3 221 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 SLC44A5Q8NCS7 719 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 PLEKHO2Q8TD55 490 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 TOX2Q96NM4 488 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 MYD88Q99836 296 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 ADAMTS10Q9H324 1103 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■■■■□ 21.3
SVIP-204ENST00000530199 TRHDEQ9UKU6 1024 aa8.35□□□□□ -1.07
SVIP-204ENST00000530199 CACNA1HO95180 2353 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 TRIM75PA6NK02 468 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 PROB1E7EW31 1015 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 TAF5LO75529 589 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 PRKD3O94806 890 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 AMY2AP04746 511 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 HOXC6P09630 235 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 GNAT1P11488 350 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 AMY2BP19961 511 aa8.34□□□□□ -1.07
SVIP-204ENST00000530199 JAM2P57087 298 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms