RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PLXNA3P51805 1871 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 SPDYE4A6NLX3 237 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 PRR33A8MZF0 331 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 F8W810 466 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 PTGESO14684 152 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 ADH1AP07327 375 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 UBA7P41226 1012 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 MTHFRP42898 656 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 CLCN4P51793 760 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 TMEM119Q4V9L6 283 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 RARS2Q5T160 578 aaKnown RBP17.84■□□□□ 0.45
CLN8-206ENST00000523237 FUT10Q6P4F1 479 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 CALML4Q96GE6 196 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 FBXL18Q96ME1 805 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 RIPOR3Q96MK2 946 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 MRPL4Q9BYD3 311 aaKnown RBP17.84■□□□□ 0.45
CLN8-206ENST00000523237 GDAQ9Y2T3 454 aa17.84■□□□□ 0.45
CLN8-206ENST00000523237 SF3B1O75533 1304 aaKnown RBP eCLIP17.83■□□□□ 0.44
CLN8-206ENST00000523237 TADA2AO75478 443 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 PLA2G4BP0C869 781 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 SMTNP53814 917 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 SLC12A3P55017 1021 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 DSG1Q02413 1049 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 RAD51AP2Q09MP3 1159 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 HSP90AA2PQ14568 343 aaPredicted RBP17.83■□□□□ 0.44
CLN8-206ENST00000523237 SF3A1Q15459 793 aaKnown RBP17.83■□□□□ 0.44
CLN8-206ENST00000523237 USP41Q3LFD5 358 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 KIAA0319Q5VV43 1072 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 C12orf76Q8N812 135 aaPredicted RBP17.83■□□□□ 0.44
CLN8-206ENST00000523237 RABGGTAQ92696 567 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 ACO2Q99798 780 aaKnown RBP17.83■□□□□ 0.44
CLN8-206ENST00000523237 NTPCRQ9BSD7 190 aaKnown RBP17.83■□□□□ 0.44
CLN8-206ENST00000523237 GPR62Q9BZJ7 368 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 SFXN1Q9H9B4 322 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 CHST7Q9NS84 486 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 NR2E1Q9Y466 385 aa17.83■□□□□ 0.44
CLN8-206ENST00000523237 CASTOR2A6NHX0 329 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 SFI1A8K8P3 1242 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 SLC16A4O15374 487 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 TEX28O15482 410 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 PLS3P13797 630 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 LONP1P36776 959 aaKnown RBP17.82■□□□□ 0.44
CLN8-206ENST00000523237 ZNF568Q3ZCX4 644 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 ATAT1Q5SQI0 421 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 ELMSAN1Q6PJG2 1045 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 GPR65Q8IYL9 337 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 SPIRE2Q8WWL2 714 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
CLN8-206ENST00000523237 CCDC94Q9BW85 323 aaPredicted RBP17.82■□□□□ 0.44
CLN8-206ENST00000523237 POMKQ9H5K3 350 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 RXFP1Q9HBX9 757 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 TSHZ2Q9NRE2 1034 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.82■□□□□ 0.44
CLN8-206ENST00000523237 TOPORSQ9NS56 1045 aaPredicted RBP17.82■□□□□ 0.44
CLN8-206ENST00000523237 CACNG4Q9UBN1 327 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 DPP7Q9UHL4 492 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 RAPGEFL1Q9UHV5 662 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 CDH22Q9UJ99 828 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 HCN4Q9Y3Q4 1203 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 CITO14578 2027 aa17.82■□□□□ 0.44
CLN8-206ENST00000523237 MTCL1Q9Y4B5 1905 aaKnown RBP17.82■□□□□ 0.44
CLN8-206ENST00000523237 C2orf16Q68DN1 1984 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 SYT1P21579 422 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 SP100P23497 879 aaPredicted RBP17.81■□□□□ 0.44
CLN8-206ENST00000523237 GRM5P41594 1212 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 YARSP54577 528 aaKnown RBP17.81■□□□□ 0.44
CLN8-206ENST00000523237 CREMQ03060 361 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 STRN3Q13033 797 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 KANK3Q6NY19 840 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 TMC5Q6UXY8 1006 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 TAS1R3Q7RTX0 852 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 RASSF8Q8NHQ8 419 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 EDAQ92838 391 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 PAAF1Q9BRP4 392 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 TARS2Q9BW92 718 aaKnown RBP17.81■□□□□ 0.44
CLN8-206ENST00000523237 CDT1Q9H211 546 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 CXCL16Q9H2A7 254 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 LARSQ9P2J5 1176 aaKnown RBP17.81■□□□□ 0.44
CLN8-206ENST00000523237 DENND4AQ7Z401 1863 aa17.81■□□□□ 0.44
CLN8-206ENST00000523237 H0YCG3 227 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 K7ELQ4 463 aaPredicted RBP17.8■□□□□ 0.44
CLN8-206ENST00000523237 KIF4AO95239 1232 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 GLUD1P00367 558 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 WEE2P0C1S8 567 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 MCF2P10911 925 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 NAB2Q15742 525 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 MPZL3Q6UWV2 235 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 TMEM161BQ8NDZ6 487 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 HASPINQ8TF76 798 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 B3GALT6Q96L58 329 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 TCHPQ9BT92 498 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 PTPRHQ9HD43 1115 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 MAN1C1Q9NR34 630 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 FNIP2Q9P278 1114 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 ODF2LQ9ULJ1 636 aa17.8■□□□□ 0.44
CLN8-206ENST00000523237 C1RP00736 705 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 PLCG1P19174 1290 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 PROZP22891 400 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 GRIN1Q05586 938 aa17.79■□□□□ 0.44
CLN8-206ENST00000523237 ELAVL2Q12926 359 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms