RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ZBTB8OSQ8IWT0 167 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 PDZD7Q9H5P4 517 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 WDR6Q9NNW5 1121 aaKnown RBP17.07■□□□□ 0.32
MRPS28-209ENST00000522987 CHST7Q9NS84 486 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 CA14Q9ULX7 337 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 DUSP12Q9UNI6 340 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 CITO14578 2027 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 MIA3Q5JRA6 1907 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 ARHGEF35A5YM69 484 aa17.06■□□□□ 0.32
MRPS28-209ENST00000522987 ST18O60284 1047 aa17.06■□□□□ 0.32
MRPS28-209ENST00000522987 KIF4AO95239 1232 aa17.06■□□□□ 0.32
MRPS28-209ENST00000522987 NTHL1P78549 312 aa17.06■□□□□ 0.32
MRPS28-209ENST00000522987 HSP90AA2PQ14568 343 aaPredicted RBP17.06■□□□□ 0.32
MRPS28-209ENST00000522987 RTP2Q5QGT7 225 aa17.06■□□□□ 0.32
MRPS28-209ENST00000522987 FRMD5Q7Z6J6 570 aa17.06■□□□□ 0.32
MRPS28-209ENST00000522987 PRMT7Q9NVM4 692 aaPredicted RBP17.06■□□□□ 0.32
MRPS28-209ENST00000522987 NOTCH4Q99466 2003 aa17.06■□□□□ 0.32
MRPS28-209ENST00000522987 PTGESO14684 152 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 RECQL4O94761 1208 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 PRKCBP05771 671 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 RFX1P22670 979 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 IGFBP6P24592 240 aaPredicted RBP17.05■□□□□ 0.32
MRPS28-209ENST00000522987 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
MRPS28-209ENST00000522987 SAFBQ15424 915 aaKnown RBP eCLIP17.05■□□□□ 0.32
MRPS28-209ENST00000522987 GLRA4Q5JXX5 417 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 FAM171A1Q5VUB5 890 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 PADI6Q6TGC4 694 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 CMASQ8NFW8 434 aaPredicted RBP17.05■□□□□ 0.32
MRPS28-209ENST00000522987 C8orf76Q96K31 380 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 NFKBIZQ9BYH8 718 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 NT5C3AQ9H0P0 336 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 IRF2BPLQ9H1B7 796 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
MRPS28-209ENST00000522987 PTPRZ1P23471 2315 aaPredicted RBP17.05■□□□□ 0.32
MRPS28-209ENST00000522987 KRBA1A5PL33 1030 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 N4BP3O15049 544 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 ADAM12O43184 909 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 OR52Z1P0C646 297 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 CLCN5P51795 746 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 TUSC3Q13454 348 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 ECM1Q16610 540 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 CDCA2Q69YH5 1023 aaPredicted RBP17.04■□□□□ 0.32
MRPS28-209ENST00000522987 ELMSAN1Q6PJG2 1045 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 PPP4R3CPQ6ZMV5 832 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 MCPH1Q8NEM0 835 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 DEPTORQ8TB45 409 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 STAMQ92783 540 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 FZD8Q9H461 694 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 PPP4R2Q9NY27 417 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 POLIQ9UNA4 740 aa17.04■□□□□ 0.32
MRPS28-209ENST00000522987 SF3B1O75533 1304 aaKnown RBP eCLIP17.03■□□□□ 0.322e-6■■■■■ 126.4
MRPS28-209ENST00000522987 XRCC6P12956 609 aaKnown RBP eCLIP17.03■□□□□ 0.32
MRPS28-209ENST00000522987 AOC1P19801 751 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 CCT6AP40227 531 aaKnown RBP17.03■□□□□ 0.32
MRPS28-209ENST00000522987 GNL2Q13823 731 aaKnown RBP17.03■□□□□ 0.32
MRPS28-209ENST00000522987 PSMD5Q16401 504 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 SPECC1Q5M775 1068 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 LILRA6Q6PI73 481 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 GRASPQ7Z6J2 395 aaPredicted RBP17.03■□□□□ 0.32
MRPS28-209ENST00000522987 SLC44A3Q8N4M1 653 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 POLR3CQ9BUI4 534 aaPredicted RBP17.03■□□□□ 0.32
MRPS28-209ENST00000522987 PRKD2Q9BZL6 878 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.03■□□□□ 0.32
MRPS28-209ENST00000522987 IGSF9Q9P2J2 1179 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 DPP7Q9UHL4 492 aa17.03■□□□□ 0.32
MRPS28-209ENST00000522987 PDCD11Q14690 1871 aaKnown RBP17.03■□□□□ 0.32
MRPS28-209ENST00000522987 FAM186AA6NE01 2351 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 CFAP54Q96N23 3096 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 PRR23AA6NEV1 266 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 CCL16O15467 120 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 ZMYND10O75800 440 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 THP07101 528 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 CYP11B2P19099 503 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 MAPK6Q16659 721 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 TTC38Q5R3I4 469 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 GPR152Q8TDT2 470 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 PRIMPOLQ96LW4 560 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 CLSTN3Q9BQT9 956 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 TTPALQ9BTX7 342 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 RPP25Q9BUL9 199 aaKnown RBP17.02■□□□□ 0.32
MRPS28-209ENST00000522987 CCDC113Q9H0I3 377 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 C2orf40Q9H1Z8 148 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 PLEKHA4Q9H4M7 779 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 FNIP2Q9P278 1114 aa17.02■□□□□ 0.32
MRPS28-209ENST00000522987 RIF1Q5UIP0 2472 aaKnown RBP17.01■□□□□ 0.31
MRPS28-209ENST00000522987 I3L4J1 428 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 LAMP2P13473 410 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 RPA1P27694 616 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 NAMPTP43490 491 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 NUBP1P53384 320 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 ANGPT1Q15389 498 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 FAM187BQ17R55 369 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 NT5DC1Q5TFE4 455 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 CCDC105Q8IYK2 499 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 DTWD2Q8NBA8 298 aa17.01■□□□□ 0.31
MRPS28-209ENST00000522987 LNX1Q8TBB1 728 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms