RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 ITIH3Q06033 890 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 DMP1Q13316 513 aaPredicted RBP20.56■□□□□ 0.88
SPIDR-220ENST00000522900 NAB2Q15742 525 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 ARSHQ5FYA8 562 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 HERC4Q5GLZ8 1057 aaPredicted RBP20.56■□□□□ 0.88
SPIDR-220ENST00000522900 TARS2Q9BW92 718 aaKnown RBP20.56■□□□□ 0.88
SPIDR-220ENST00000522900 NT5C3AQ9H0P0 336 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 POMKQ9H5K3 350 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 PTPRHQ9HD43 1115 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 CHST7Q9NS84 486 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 ADAM28Q9UKQ2 775 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 CLIC4Q9Y696 253 aa20.56■□□□□ 0.88
SPIDR-220ENST00000522900 PHLPP2Q6ZVD8 1323 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 TEX28O15482 410 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 URODP06132 367 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 THP07101 528 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 GLUD2P49448 558 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 DSG1Q02413 1049 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
SPIDR-220ENST00000522900 TUSC3Q13454 348 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 DCAF4L1Q3SXM0 396 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 CES5AQ6NT32 575 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 FUT10Q6P4F1 479 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 FAM173BQ6P4H8 233 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 PPFIBP1Q86W92 1011 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 CEP120Q8N960 986 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 CDK5RAP3Q96JB5 506 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 FBXL18Q96ME1 805 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 NTPCRQ9BSD7 190 aaKnown RBP20.55■□□□□ 0.88
SPIDR-220ENST00000522900 DZANK1Q9NVP4 752 aa20.55■□□□□ 0.88
SPIDR-220ENST00000522900 TADA2AO75478 443 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 MYBP10242 640 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 SYT1P21579 422 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 IGFBP6P24592 240 aaPredicted RBP20.54■□□□□ 0.88
SPIDR-220ENST00000522900 HSP90AA2PQ14568 343 aaPredicted RBP20.54■□□□□ 0.88
SPIDR-220ENST00000522900 TMC5Q6UXY8 1006 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 ZBTB33Q86T24 672 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 KCTD17Q8N5Z5 321 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 HASPINQ8TF76 798 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 AK8Q96MA6 479 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 TIPINQ9BVW5 301 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 CDT1Q9H211 546 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 C17orf75Q9HAS0 396 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 RXFP1Q9HBX9 757 aa20.54■□□□□ 0.88
SPIDR-220ENST00000522900 RBM19Q9Y4C8 960 aaKnown RBP20.54■□□□□ 0.88
SPIDR-220ENST00000522900 PRR33A8MZF0 331 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 KIF4AO95239 1232 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 PLS3P13797 630 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 PDCP20941 246 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 UBA7P41226 1012 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 OSTNP61366 133 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 RESTQ13127 1097 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 DHX8Q14562 1220 aaKnown RBP20.53■□□□□ 0.88
SPIDR-220ENST00000522900 KARSQ15046 597 aaKnown RBP20.53■□□□□ 0.88
SPIDR-220ENST00000522900 GLRA4Q5JXX5 417 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 KIAA1841Q6NSI8 718 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 ZBTB45Q96K62 511 aaPredicted RBP20.53■□□□□ 0.88
SPIDR-220ENST00000522900 MRPL4Q9BYD3 311 aaKnown RBP20.53■□□□□ 0.88
SPIDR-220ENST00000522900 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 BLOC1S4Q9NUP1 217 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 SSX2IPQ9Y2D8 614 aa20.53■□□□□ 0.88
SPIDR-220ENST00000522900 ABLIM1O14639 778 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 BMP15O95972 392 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 SPATA31D3P0C874 917 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 MTHFRP42898 656 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 PTPAQ15257 358 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 USP41Q3LFD5 358 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 SPECC1Q5M775 1068 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 SPATA31D4Q6ZUB0 917 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 USP49Q70CQ1 688 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 TMEM161BQ8NDZ6 487 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 SPIRE2Q8WWL2 714 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 RIN2Q8WYP3 895 aaPredicted RBP20.52■□□□□ 0.88
SPIDR-220ENST00000522900 EDAQ92838 391 aa20.52■□□□□ 0.88
SPIDR-220ENST00000522900 PPP1R10Q96QC0 940 aaKnown RBP20.52■□□□□ 0.88
SPIDR-220ENST00000522900 ADH1AP07327 375 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 RPL17P18621 184 aaKnown RBP20.51■□□□□ 0.87
SPIDR-220ENST00000522900 PLCG1P19174 1290 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 PROZP22891 400 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 MARCKSP29966 332 aaPredicted RBP20.51■□□□□ 0.87
SPIDR-220ENST00000522900 LONP1P36776 959 aaKnown RBP20.51■□□□□ 0.87
SPIDR-220ENST00000522900 GRM5P41594 1212 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 MCM6Q14566 821 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 ZNF568Q3ZCX4 644 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 RTP2Q5QGT7 225 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 ATAT1Q5SQI0 421 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 PRSS55Q6UWB4 352 aaPredicted RBP20.51■□□□□ 0.87
SPIDR-220ENST00000522900 ALKAL1Q6UXT8 129 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 GPBP1Q86WP2 473 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 PALB2Q86YC2 1186 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 GLYCTKQ8IVS8 523 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 CALML4Q96GE6 196 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 INTS4Q96HW7 963 aaKnown RBP20.51■□□□□ 0.87
SPIDR-220ENST00000522900 RIPOR3Q96MK2 946 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 NECTIN4Q96NY8 510 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 KCND2Q9NZV8 630 aa20.51■□□□□ 0.87
SPIDR-220ENST00000522900 TRIOO75962 3097 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 SMIM28A0A1B0GU29 152 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 C2CD4DB7Z1M9 353 aa20.5■□□□□ 0.87
SPIDR-220ENST00000522900 K7ELQ4 463 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms